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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank61Aligned Residues252
% Identity24%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   214.....220.........230.........240.........250.........260.........270.........280.........290...
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Query Sequence  NEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLTLSHPNVIKFYGVCTMKEPI
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Template Sequence  SDNYDVKEELGKGAFSVVRRCVHKTT. . . . GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH
Template Known Secondary structure  TTTTTTTT....


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   10.........20.........30..... ....40.........50.........60.........70.........80.....
 
   294.....300.........310.........320.........330.........340.........350... ......360.........370
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Query Sequence  MIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLN. . . SKKILKISDFGLSVKGV
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Template Sequence  YLVFDLVTGGELFEDIV. AREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN
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S
BT.T
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TT
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T
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   86...90.........100.. .......110.........120.........130.........140.........150.........160....
 
   371........380.........390.........400.........410.........420.........430.........440... .....
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Query Sequence  AIKERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLAVE. . VELPV
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Template Sequence  DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPF. . WDEDQHRLYAQIKAGAYDYPSPEWDTVTP
Template Known Secondary structure  T

B


S
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   166...170.........180.........190.........200........ .210... ......220.........230.........240..
 
   449450.........460.........470...
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Query Sequence  FIANIFEQSRQYETEDRISSKQIIQ
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Template Sequence  EAKSLIDSMLTVNPKKRITADQALK
Template Known Secondary structure  S
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TT
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   243......250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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