Return to main results Retrieve Phyre Job Id

Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank114Aligned Residues268
% Identity21%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   212.......220.........230.........240.........250....... ..260.........270.... .....280.........
Predicted Secondary structure 














.
.




Query SS confidence 













































.
















.














Query Sequence  LNNEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHL. SANEKILFLREANVMLT. LSHPNVIKFYGVCTM
Query Conservation 
          

 
 

 
  
            



 
     .          
   
  .
 




        
Alig confidence 



























....













.
















.














Template Conservation 
 
  
     

 
 

 

 
    
....   



 
                
   
     
  
         
Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKT. . . . DRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT
Template Known Secondary structure 

STT
SSTTT....

GGG

STTTTTTTSSTTB


B
Template Predicted Secondary structure 







....














Template SS confidence 















































































   240.........250.........260....... ..270.........280.........290.........300.........310.....
 
   290.........300.........310.........320.........330.........340.........350.........360.........
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  KEPIMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKILKISDFGLSVKG
Query Conservation       

 
    


   
                 

  

 


   







 



      

 




   
Alig confidence 




















.

























































Template Conservation        
        
     .                
           
 
      

         
 
 
 
   
Template Sequence  ESRLFFVIEYVNGGDLMFHMQ. RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG
Template Known Secondary structure  SS


S
B.TTSS

TT
B




GGG
TTS



TT
B

Template Predicted Secondary structure 













.



































Template SS confidence 















































































   316...320.........330...... ...340.........350.........360.........370.........380.........390....
 
   370.........380.........390.........400.........410.........420.........430.........440.........
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  VAIKERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLAVEVELPVF
Query Conservation                
 


 
       







  
 

 
 
  

             
             
  
Alig confidence 











































.




..
















..








Template Conservation                                






 



 
.
  

..           
     ..      
  
Template Sequence  LRPGDTTSFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA. GRSPF. . DQNTEDYLFQVILEKQI. . RIPRSMSVK
Template Known Secondary structure 

TT

B


S
GGG

TT

B
T.SS
S
..





..


TTS
Template Predicted Secondary structure 

































.




..






..






Template SS confidence 















































































   395....400.........410.........420.........430........ .440... ......450.........460 .........
 
   450.........460.........470. ........480.........
Predicted Secondary structure 






..





Query SS confidence 





















. .

















Query Sequence  IANIFEQSRQYETEDRISSKQI. . IQIFKEEVGFHEIETSGI
Query Conservation 
  

   
   
  


  

..                  
Alig confidence 





















..

















Template Conservation    


  

  

  



       


 

         
Template Sequence  AASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMM
Template Known Secondary structure  T
SSSTTSTTTSTTTSGGGSS

Template Predicted Secondary structure 


















Template SS confidence 









































   480.........490.........500.........510.........520.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D