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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank89Aligned Residues241
% Identity26%Templatec1mruB_
PDB info PDB header:transferaseChain: B: PDB Molecule:probable serine/threonine-protein kinase pknb; PDBTitle: intracellular ser/thr protein kinase domain of2 mycobacterium tuberculosis pknb.
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   214.....220.........230.........240.........250........ .260.........270.........280.........290..
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Query Sequence  NEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLS. ANEKILFLREANVMLTLSHPNVIKFYGVCTMKEP
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Template Sequence  SDRYELGEILGFGGMSEVHLARDLRL. . . . HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP
Template Known Secondary structure  TTT
SSTTT....TSTTTTSSSST

BTTB


S
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   8.10.........20.........30... ......40.........50.........60.........70.........80...
 
   293 ......300.........310.........320.........330.........340.........350.........360........
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Query Sequence  I. . . . MIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKILKISDFGLSVK
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Template Sequence  AGPLPYIVMEYVDGVTLRDIVH. TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR.
Template Known Secondary structure  S




.SS
S

TT
B



SGGGTT



TTS
B.
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   84.....90.........100..... ....110.........120.........130.........140.........150.........160.
 
   369370.........380.........390.........400.........410.........420.........430.........440. .....
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Query Sequence  GVAIKERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLA. . VEVEL
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Template Sequence  . . . . . . . . . . AITAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT. GEPPF. . TGDSPVSVAYQHVREDPIPPSARHEGL
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SS

T



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   162.......170.........180.........190...... ...200. ........210.........220........
 
   447..450.........460.........470...
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Query Sequence  PVFIANIFEQSRQYETEDRISSKQIIQ
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Template Sequence  SADLDAVVLKALAKNPENRYQTAAEMR
Template Known Secondary structure 
T
SSGGGS
SS
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   244.....250.........260.........270
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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