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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank284Aligned Residues243
% Identity26%Templatec1jnkA_
PDB info PDB header:transferaseChain: A: PDB Molecule:c-jun n-terminal kinase; PDBTitle: the c-jun n-terminal kinase (jnk3s) complexed with mgamp-pnp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   215....220.........230.........240.........250.........260.........270.........280.........290
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Query Sequence  EQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLTLSHPNVIKFYGVCTMK. . . .
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Template Sequence  KRYQNLKPIGSGAQGIVCAAYDAVL. . . . DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE
Template Known Secondary structure  TT
SSTTT....TSGGGS


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   62.......70.........80...... ...90.........100.........110.........120.........130.......
 
   291........300.........310.........320.........330.........340.........350.........360........
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Query Sequence  . . EPIMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKILKISDFGLSVK
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Template Sequence  EFQDVYLVMELMDANLCQVIQ. . . . MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLASF
Template Known Secondary structure  T



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   138.140.........150........ .160.........170.........180.........190.........200.........210...
 
   369370.........380.........390.........400.........410.........420.........430.........440...
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Query Sequence  GVAIKERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLAVE. . . . .
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Template Sequence  MMTPYVVTRY. . . . . YRAPEVILGMGYKENVDIWSVGCIMGEMVR. HKILF. . PGRDYIDQWNKVIEQLGTPCPEFMKKL
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   219220........ .230.........240.........250........ .260... ......270.........280.........290
 
   444.....450.........460.........470...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VELPVFIANIFEQSRQYETEDRISSKQIIQ
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Template Sequence  QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ
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   291........300.........310.........320.........330.........340.........350.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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