 |
| Job Description | O01798 | | Confidence | 99.65% | Date | Fri May 3 21:22:31 BST 2013 |
| Rank | 369 | Aligned Residues | 96 |
| % Identity | 22% | Template | c1a81E_ |
| PDB info |
PDB header:complex (transferase/peptide) | Chain: E: PDB Molecule:syk kinase; |
PDBTitle: crystal structure of the tandem sh2 domain of the syk kinase bound to2 a dually tyrosine-phosphorylated itam
|
| Resolution | 3.00 Å |
|
 |
|   |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
|
|
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | N | I | D | N | F | P | F | Y | H | G | F | M | G | R | N | E | C | E | A | M | L | S | N | . |
. |
. |
. |
H | G | D | F | L | I | R | M | T | E | I | G | K | R | V | A | Y | V | I | S | I | K | W | K | Y | Q | N | I | H | V | L | V | K | R | T | K | T | K | K | L | Y | W | T | K | K | Y | A | F | K | S | I | C |
| Query Conservation |   |
  |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |
|
|   |   | . | . | . | . |   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|
|   |
| . | . |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
| Template Sequence |   |
T | A | H | E | K | M | P | W | F | H | G | K | I | S | R | E | E | S | E | Q | I | V | L | I | G | S | K | T | N | G | K | F | L | I | R | A | R | . |
. |
D | N | N | G | S | Y | A | L | C | L | L | H | E | G | K | V | L | H | Y | R | I | D | K | D | K | T | G | K | L | S | I | P | E | G | K | K | F | D | T | L | W |
| Template Known Secondary structure |   |
T | S | G | G | G |
| T | T |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | S | S |
|
|
| T | T |
|  |  |  |  |  |
| . | . | S | S | S | S |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |
| T | T | S |
|
| B | S |
|  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
| . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | |
|
. | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
|   |
|   |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
E | L | I | A | Y | H | K | R | N | H | K | P | I | Y | E | G | M | T | L | I | C | G |
| Query Conservation |   |
  |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
| Template Sequence |   |
Q | L | V | E | H | Y | S | Y | K | A | D | G | L | L | R | V | L | T | V | P | C | Q |
| Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
|
| T | T | S | S | S |
|
|
| S | B |
|
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
239 | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|