Job Description Q965N4 Confidence 99.32% Date Fri May 3 21:39:00 BST 2013 Rank 115 Aligned Residues 71 % Identity 20% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.									.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.									.	.	.	.	.	.	.	.						.
Query SS confidence																																																.									.	.	.	.	.	.	.	.						.
Query Sequence		A	E	F	H	G	L	I	D	R	N	E	A	E	K	M	L	L	E	A	G	E	G	S	Y	L	V	R	E	S	N	R	S	R	D	A	C	T	L	C	M	I	F	D	A	K	V	.	M	N	Y	K	L	Y	Y	D	.	.	.	.	.	.	.	.	G	Q	F	Y	V	.	G	E	K	R	F	D	T	M	D	L	L
Query Conservation																																																.									.	.	.	.	.	.	.	.						.
Alig confidence						.																																										.									.	.	.	.	.	.	.	.						.
Template Conservation						.
Template Sequence		P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	L	E	K	E	N	P	L	A	L	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I
Template Known Secondary structure		T	T			.												T	T	S		T	T								S	S		T	T										T	T											S		S	S	T	T	S			S					T	T				S	S
Template Predicted Secondary structure						.
Template SS confidence
		7	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		119	120
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		86	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D