Job Description Q965N4 Confidence 100.00% Date Fri May 3 21:39:00 BST 2013 Rank 9 Aligned Residues 185 % Identity 30% Template c3fk2B_ PDB info PDB header:signaling protein, hydrolase activator Chain: B: PDB Molecule:glucocorticoid receptor dna-binding factor 1; PDBTitle: crystal structure of the rhogap domain of human2 glucocorticoid receptor dna-binding factor 1 Resolution 2.80 Å Model Dimensions (Å) X:54.667 Y:41.806 Z:36.074

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		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		K	R	M	F	G	V	D	I	T	T	L	C	M	A	H	G	A	D	L	P	P	I	V	P	L	C	I	G	E	V	E	S	R	G	L	D	V	E	G	I	Y	R	V	S	G	S	Y	D	H	M	E	K	L	K	Q	Q	F	D	S	N	Q	Y	V	D	L	.	A	T	V	C	D	I	H	T	V	C	G	L	L	K
Query Conservation																																																																			.
Alig confidence																			.																																																.
Template Conservation																			.
Template Sequence		S	N	Y	F	G	V	P	L	T	T	V	V	T	P	E	K	P	.	I	P	I	F	I	E	R	C	I	E	Y	I	E	A	T	G	L	S	T	E	G	I	Y	R	V	S	G	N	K	S	E	M	E	S	L	Q	R	Q	F	D	Q	D	H	N	L	D	L	A	E	K	D	F	T	V	N	T	V	A	G	A	M	K
Template Known Secondary structure			S	S	T	T	S		G	G	G	G			S	S	S		.	S																T	T	S	T	T	T	T	T	S																		T	T			S	G	G	G	T
Template Predicted Secondary structure																			.
Template SS confidence
		1244	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260		.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	F	R	L	L	P	Q	Q	L	I	P	F	S	V	H	K	Q	L	L	V	A	Y	Q	E	T	N	Q	R	S	T	H	E	R	E	R	Q	I	R	K	V	M	M	E	L	S	D	A	N	I	I	T	L	G	A	V	L	A	H	L	K	K	V	A	D	H	S	A	K	N	K	M	T	V	E	N	L	A	T	I
Query Conservation
Alig confidence																															.	.	.
Template Conservation																															.	.	.
Template Sequence		S	F	F	S	E	L	P	D	P	L	V	P	Y	N	M	Q	I	D	L	V	E	A	H	K	I	N	D	R	E	.	.	.	Q	K	L	H	A	L	K	E	V	L	K	K	F	P	K	E	N	H	E	V	F	K	Y	V	I	S	H	L	N	K	V	S	H	N	N	K	V	N	L	M	T	S	E	N	L	S	I	C
Template Known Secondary structure							S	S	S		S	S												T	T			S			.	.	.												T	S																				T	T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		1323	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.				.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.				.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		F	S	P	T	L	F	C	S	G	S	I	P	A	M	P	N	.	.	.	H	Q	L	L	H	F	L	I	N	N	P	R	V	V
Query Conservation																		.	.	.
Alig confidence																		.	.	.
Template Conservation
Template Sequence		F	W	P	T	L	M	R	P	D	M	D	A	L	T	A	T	R	T	Y	Q	T	I	I	E	L	F	I	Q	Q	C	P	F	F
Template Known Secondary structure																														T
Template Predicted Secondary structure
Template SS confidence
		1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D