Job Description Q965N4 Confidence 100.00% Date Fri May 3 21:39:00 BST 2013 Rank 13 Aligned Residues 179 % Identity 32% Template c2ovjA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rac gtpase-activating protein 1; PDBTitle: the crystal structure of the human rac gtpase activating protein 12 (racgap1) mgcracgap. Resolution 1.49 Å Model Dimensions (Å) X: Y: Z:

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		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		D	I	T	T	L	C	M	A	H	G	A	D	L	P	P	I	V	P	L	C	I	G	E	V	E	S	R	G	L	D	V	E	G	I	Y	R	V	S	G	S	Y	D	H	M	E	K	L	K	Q	Q	F	D	S	N	Q	Y	V	D	L	.	A	T	V	C	D	I	H	T	V	C	G	L	L	K	L	Y	F	R	L	L
Query Conservation																																																													.
Alig confidence																																																													.
Template Conservation
Template Sequence		M	L	A	D	F	V	S	Q	T	S	P	M	I	P	S	I	V	V	H	C	V	N	E	I	E	Q	R	G	L	T	E	T	G	L	Y	R	I	S	G	C	D	R	T	V	K	E	L	K	E	K	F	L	R	V	K	T	V	P	L	L	S	K	V	D	D	I	H	A	I	C	S	L	L	K	D	F	L	R	N	L
Template Known Secondary structure			G	G	G	G			S	S	S	S																	T	T	T	S	T	T	T	T	T	S																T	T		S				G	G	G																	T	S
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	Q	L	I	P	F	S	V	H	K	Q	L	L	V	A	Y	Q	E	T	N	Q	R	S	T	H	E	R	E	R	Q	I	R	K	V	M	M	E	L	S	D	A	N	I	I	T	L	G	A	V	L	A	H	L	K	K	V	A	D	H	S	A	K	N	K	M	T	V	E	N	L	A	T	I	F	S	P	T	L	F
Query Conservation
Alig confidence																									.	.	.																																		.
Template Conservation																									.	.	.																																		.
Template Sequence		K	E	P	L	L	T	F	R	L	N	R	A	F	M	E	A	A	E	I	T	D	E	D	.	.	.	N	S	I	A	A	M	Y	Q	A	V	G	E	L	P	Q	A	N	R	D	T	L	A	F	L	M	I	H	L	Q	R	V	A	Q	.	S	P	H	T	K	M	D	V	A	N	L	A	K	V	F	G	P	T	I	V
Template Known Secondary structure		S	S		T	T		T	T	T											S	S			.	.	.												T	S																					.		T	T	S																T
Template Predicted Secondary structure																									.	.	.																																		.
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.				.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.		.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.										.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.
Query Sequence		C	S	G	S	I	P	A	M	P	N	.	.	.	.	.	.	.	.	.	H	Q	L	L	H	F	L	I	N	N	P	R	V	V
Query Conservation												.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	H	A	V	P	N	P	D	P	V	T	M	L	Q	D	I	K	R	Q	P	K	V	V	E	R	L	L	S	L	P	L	E	Y
Template Known Secondary structure				S	S	S	S																							S
Template Predicted Secondary structure
Template SS confidence
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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