Return to main results Retrieve Phyre Job Id

Job DescriptionQ965N4
Confidence99.62%DateFri May 3 21:39:00 BST 2013
Rank35Aligned Residues96
% Identity17%Templatec2izvA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:suppressor of cytokine signaling 4; PDBTitle: crystal structure of socs-4 in complex with elongin-b and2 elongin-c at 2.55a resolution
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.........70.........80.........90.........100. ....... .110.........120..
Predicted Secondary structure 


























.






.....


Query SS confidence 




















































.






. . . . .













Query Sequence  AEFHGLIDRNEAEKMLLEAGEGSYLVRESNRSRDACTLCMIFDAKVMNYKLYY. DGQFYVG. . . . . EKRFDTMDLLVADG
Query Conservation   
 

  

 


  
     
  


 
    
   

        
 

  .
      ..... 
 
     

 

Alig confidence 




















































.






.....









....
Template Conservation   

 
 


 


 

     
 



 
        


       
 

    
 
 
         
 

  
....
Template Sequence  PCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGL. . . .
Template Known Secondary structure  TT

TT

TT
SSTT
STT
TTS
TT
TTS

BSS....
Template Predicted Secondary structure 



































....
Template SS confidence 















































































   285....290.........300.........310.........320.........330.........340.........350.........360
 
   123......130.........140.........
Predicted Secondary structure 








Query SS confidence 


























Query Sequence  LISMFVDLHAADYIKRMADEAIYEDSP
Query Conservation 
        
   
           

Alig confidence  .

























Template Conservation  .
 

            
  
     
Template Sequence  . LEHYKDPSACMFFEPLLSTPLIRTFP
Template Known Secondary structure  .T

GGG

TTS







S
Template Predicted Secondary structure  .



















Template SS confidence 


























   361........370.........380......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D