Job Description Q965N4 Confidence 100.00% Date Fri May 3 21:39:00 BST 2013 Rank 1 Aligned Residues 387 % Identity 40% Template c1xa6A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:beta2-chimaerin; PDBTitle: crystal structure of the human beta2-chimaerin Resolution 3.20 Å Model Dimensions (Å) X:71.084 Y:80.223 Z:50.412

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	W	K	Q	N	L	Y	L	L	Q	E	K	A	P	K	P	N	A	V	L	C	R	K	P	L	Q	Q	R	P	R	H	F	G	A	E	F	H	G	L	I	D	R	N	E	A	E	K	M	L	L	E	A	G	E	G	S	Y	L	V	R	E	S	N	R	S	R	D	A	C	T	L	C	M	I	F	D	A	K	V	M
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		I	W	K	S	Y	L	Y	Q	L	Q	Q	E	A	P	R	P	K	R	I	I	C	P	R	E	V	E	N	R	P	K	Y	Y	G	R	E	F	H	G	I	I	S	R	E	Q	A	D	E	L	L	G	.	G	V	E	G	A	Y	I	L	R	E	S	Q	R	Q	P	G	C	Y	T	L	A	L	R	F	G	N	Q	T	L
Template Known Secondary structure		S	S											S					B					S	S				S	S		S	S		S	S																.	S		T	T	B							S	S	S	T	T									T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	K	L	Y	Y	D	G	Q	F	Y	V	G	E	K	R	F	D	T	M	D	L	L	V	A	D	G	L	I	S	M	F	V	D	L	H	A	A	D	Y	I	K	R	M	A	D	E	A	I	Y	E	D	S	P	Y	S	R	Y	T	N	A	A	A	T	T	S	D	I	V	R	R	P	V	T	R	A	H	N	F	T
Query Conservation
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Y	R	L	F	H	D	G	K	H	F	V	G	E	K	R	F	E	S	I	H	D	L	V	T	D	G	L	I	T	L	Y	I	E	T	K	A	A	E	Y	I	S	K	M	T	T	N	P	I	Y	E	H	I	G	Y	A	T	L	L	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	E	K	T	H	N	F	K
Template Known Secondary structure								S	S	S				S	S	S					S	S															S								T	T	S	S			G	G	G	S	S	S	S	S	S				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.													.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	T	F	K	A	P	H	Y	C	D	Y	C	R	N	F	L	W	G	L	V	H	Q	G	M	R	C	E	D	C	G	F	A	A	H	K	K	C	S	E	K	T	L	H	D	C	V	P	D	S	K	Y	V	K	R	M	F	G	V	D	I	T	T	L	C	M	A	H	G	A	D	L	P	P	I	V	P	L	C	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	T	F	R	G	P	H	W	C	E	Y	C	A	N	F	M	W	G	L	I	A	Q	G	V	R	C	S	D	C	G	L	N	V	H	K	Q	C	S	K	H	V	P	N	D	C	Q	P	D	L	K	R	I	K	K	V	Y	C	C	D	L	T	T	L	V	K	A	H	N	T	Q	R	P	M	V	V	D	I	C	I
Template Known Secondary structure						S	S			B		T	T	T			B			T	T	T	T						S	S	S				B		T	G	G	G	T	T	S		S				T	T	T	T	S					T	T	S										T		S	S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.				290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		G	E	V	E	S	R	G	L	D	V	E	G	I	Y	R	V	S	G	S	Y	D	H	M	E	K	L	K	Q	Q	F	D	S	N	Q	.	.	.	Y	V	D	L	A	T	V	C	D	I	H	T	V	C	G	L	L	K	L	Y	F	R	L	L	P	Q	Q	L	I	P	F	S	V	H	K	Q	L	L	V	A	Y	Q	E
Query Conservation																																				.	.	.
Alig confidence																																				.	.	.
Template Conservation
Template Sequence		R	E	I	E	A	R	G	L	K	S	E	G	L	Y	R	V	S	G	F	T	E	H	I	E	D	V	K	M	A	F	D	R	D	G	E	K	A	D	I	S	A	N	V	Y	P	D	I	N	I	I	T	G	A	L	K	L	Y	F	R	D	L	P	I	P	V	I	T	Y	D	T	Y	S	K	F	I	D	A	A	K	I
Template Known Secondary structure							S		S	S	S	T	T	T	T	T	S															S	S	T	T	T	T	S				S	S	S	S			T															S	S		T	T		S	T	T						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.								.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.
Query Sequence		T	N	Q	R	S	T	H	E	R	E	R	Q	I	R	K	V	M	M	E	L	S	D	A	N	I	I	T	L	G	A	V	L	A	H	L	K	K	V	A	D	H	S	A	K	N	K	M	T	V	E	N	L	A	T	I	F	S	P	T	L	F	C	S	G	S	I	P	A	M	P	.	.	.	.	.	.	.	N	H	Q
Query Conservation																																																																								.	.	.	.	.	.	.
Alig confidence						.	.	.																																																																.	.	.	.	.	.	.
Template Conservation						.	.	.
Template Sequence		S	N	A	D	.	.	.	E	R	L	E	A	V	H	E	V	L	M	L	L	P	P	A	H	Y	E	T	L	R	Y	L	M	I	H	L	K	K	V	T	M	N	E	K	D	N	F	M	N	A	E	N	L	G	I	V	F	G	P	T	L	M	R	P	P	E	D	S	T	L	T	T	L	H	D	M	R	Y	Q	K	L
Template Known Secondary structure						.	.	.											T	T	S											T	T	T	T	T					T	T	T	T	T	S												T	T	T	S						S		T	T	G	G	G	G	T
Template Predicted Secondary structure						.	.	.
Template SS confidence
		377	.	.	380				.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	H	F	L	I	N	N	P	R	V	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	Q	I	L	I	E	N	E	D	V	L	F
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		454	.	.	.	.	.	460	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D