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Job DescriptionQ965N4
Confidence99.52%DateFri May 3 21:39:00 BST 2013
Rank80Aligned Residues108
% Identity27%Templatec1a81E_
PDB info PDB header:complex (transferase/peptide)Chain: E: PDB Molecule:syk kinase; PDBTitle: crystal structure of the tandem sh2 domain of the syk kinase bound to2 a dually tyrosine-phosphorylated itam
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60........ .70.........80.........90.........100. ..
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Query Sequence  APKPNAVLCRKPLQQRPRHFGAEFHGLIDRNEAEKMLLEAG. . EGSYLVRESNRSRDACTLCMIFDAKVMNYKLYY. . DG
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Template Sequence  GVQPKTPQLEKLIATTAHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRAR. DNNGSYALCLLHEGKVLHYRIDKDKTG
Template Known Secondary structure  T






TSGGG
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   112.......120.........130.........140.........150.........160... ......170.........180.........190
 
   104.....110 .........120.........130.........140.........
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Query Sequence  QFYVGEK. RFDTMDLLVADGLISMFVDLHAADYIKRMADEAIYEDSP
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Template Sequence  KLSIPEGKKFDTLWQLV. . . . . . . . . EHYSYK. . . . ADGLLRVLTVP
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   225....230.........240. ...... ..250........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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