Return to main results Retrieve Phyre Job Id

Job DescriptionO62482
Confidence26.94%DateFri May 3 21:35:38 BST 2013
Rank269Aligned Residues31
% Identity16%Templated2ba0a1
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   436...440.. .......450.........460........
Predicted Secondary structure 



..












Query SS confidence 






. .

























Query Sequence  YTNDIIF. . VVEKCDDGWFIGTSLRTGDFGIFPGN
Query Conservation    

 
 ..



 




 
     
  



 
Alig confidence 






..












..










Template Conservation 
 



 
 
  
   
  
 
..     
 
   
Template Sequence  SVGDVVIGIIREVAANGWAVDI. . YSPYQAFLPVS
Template Known Secondary structure 
TT

SS
..SSSS
GG
Template Predicted Secondary structure 






..



Template SS confidence 


































   56...60.........70....... ..80........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D