Return to main results Retrieve Phyre Job Id

Job DescriptionO62482
Confidence99.62%DateFri May 3 21:35:38 BST 2013
Rank60Aligned Residues64
% Identity23%Templatec2ed1A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:130 kda phosphatidylinositol 4,5-biphosphate- PDBTitle: solution structure of the sh3 domain of 130 kda2 phosphatidylinositol 4,5-biphosphate-dependent arf1 gtpase-3 activating protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   408.410.........420.........430.........440.........450..... ....460.........470.
Predicted Secondary structure 
































.







Query SS confidence 















































.















Query Sequence  AASLIPKGSEMYRAVYPYQPQKEDELQLYTNDIIFVVEKCDDGWFIGT. SLRTGDFGIFPGNYVK
Query Conservation               




 
   




  

 
 



 




 
 .    
  



 



Alig confidence 















































.















Template Conservation 


          

 

      


   

 
 

      

 
      
  
 

  

 
Template Sequence  SSGSSGNKVRRVKTIYDCQADNDDELTFIEGEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVH
Template Known Secondary structure 
S

SS


SS



SSSSB



SS
SS

SSSTT
TT
GGG
Template Predicted Secondary structure 

































Template SS confidence 
































































   2.......10.........20.........30.........40.........50.........60......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D