Job Description O62482 Confidence 69.77% Date Fri May 3 21:35:38 BST 2013 Rank 239 Aligned Residues 96 % Identity 18% Template c1m9sA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:internalin b; PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains. Resolution 2.65 Å

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		174	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.																210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure												.	.	.															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	G	D	I	I	R	I	I	R	E	.	.	.	V	D	G	Y	W	M	E	G	E	R	N	G	R	S	.	G	I	F	P	T	S	Y	V	Q	I	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	Q	G	D	S	Q	K	M	R	A	I	Y	P	F	T	A	R	S	D	T	E	L	S	L
Query Conservation												.	.	.															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	G	K	N	M	R	I	L	R	E	A	K	T	P	I	T	T	W	Y	Q	F	S	I	G	G	K	V	I	G	W	V	D	T	R	A	L	N	T	F	Y	K	Q	S	M	E	K	P	T	R	L	T	R	Y	V	S	A	N	K	A	G	E	S	Y	Y	K	V	P	V	A	D	N	P	V	K	R	G	T	L	A	K
Template Known Secondary structure			S	S											S	S									T	T								T	T	T							G	G	G												T	T	T	T	T	S				S	S	S	S			G	G	G					G	G	G
Template Predicted Secondary structure
Template SS confidence
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		K	R	G	E	I	I	T	R	R	R	Q	.	.	.	I	D	S	N	W	L	E	G	S	N	Q	I	G	I	V	G	I	F	P	A	S	Y	V	E
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		Y	K	N	Q	K	L	I	V	D	C	Q	A	T	I	E	G	Q	L	W	Y	R	I	R	T	S	S	T	F	I	G	W	T	K	A	A	N	L	R
Template Known Secondary structure		S	T	T												T	T									S	S	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D