Return to main results Retrieve Phyre Job Id

Job DescriptionQ18204
Confidence99.75%DateSat Apr 13 12:59:27 BST 2013
Rank33Aligned Residues56
% Identity16%Templatec2dx1A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho guanine nucleotide exchange factor 4; PDBTitle: crystal structure of rhogef protein asef
Resolution2.36 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   215....220.........230.........240.........250.........260.........270..
Predicted Secondary structure 

























Query SS confidence 

























































Query Sequence  NLLVVEPFSGRSPLDLTVRPGEWIKCTGRPVDDWLWAVRIADEKQGFIPNKVVILATD
Query Conservation     




 
   



   

 
 



  


        
  
  
 


 
   
Alig confidence 






































..
















Template Conservation     
         


 
  
  
 
       

 
  ..    



  

     
Template Sequence  CAEALWDHVTXDDQELGFKAGDVIEVXDATNREWWWGRV. . ADGEGWFPASFVRLRVN
Template Known Secondary structure  SS
B



TTB

B
TT


SSS
..SS
GGG
S
Template Predicted Secondary structure 





















..












Template SS confidence 

























































   127..130.........140.........150.........160..... ....170.........180..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D