6 c3sr9A_ Probab=100.00  E-value=0  Score=604.75  Aligned_columns=355  Identities=32%

Q ss_pred             CCHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf             20788899999988740245420001369999998751365446645675378643333788887753676167057899
Q batch____       237 IEADLFVDRFEIIRRPINPRESMEKTGISEEFDRLSQEALPAEQYLSKREGRRPVNAEKNRYKNIVPFDHTRVILTDRPN  316 (668)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ef~~l~~~~~~~~~~~~~~~g~~peN~~KNRy~dIlPyD~sRV~L~~~~~  316 (668)
                      |++++|...+..+...       +..||.+||+.|     +.....+...+++|+|+.||||.||+|||||||+|++.++
T Consensus         7 i~~~~~~~~~~~~~~~-------~~~~~~~Ef~~i-----~~~~~~~~~~~~~~~N~~kNRy~~i~~yd~sRV~L~~~~~   74 (568)
T c3sr9A_           7 IPITDMAEHMERLKAN-------DSLKLSQEYESI-----DPGQQFTWEHSNLEANKPKNRYANVIAYDHSRVILQPLEG   74 (568)
T ss_dssp             EETTSHHHHHHHHHHH-------HHHHHHHHHHHC-----CCCCCCCCHHHHSTTTGGGCSSTTCCCCGGGEEECCCCTT
T ss_pred             CCHHHHHHHHHHHHCC-------CHHHHHHHHHHH-----CCCCCCCCCHHCCHHCCCCCCCCCCCCCCCCEEEECCCCC
T ss_conf             4499999999987427-------713589999861-----2467787301027000001688889865665167037788


Q ss_pred             CCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCC-CCEECCCCCCCCCC
Q ss_conf             98887034122015776554455556765079960897789999988764469828997556533-85720241765788
Q batch____       317 TPGSDYINASYVRFENSQRTKNVTFACEKSFIATQGCLETTISDFWSMVWQENSRVIVMPTMENE-RKEKCARYWPAEVN  395 (668)
Q Consensus       317 ~~~sDYINAsyI~~~~~~~~~~~g~~~~k~YIaTQgPL~~Ti~DFWrMVweqnv~vIVMLt~~~E-~~~KC~~YWP~e~~  395 (668)
                      .+++||||||||+          ||..+++||||||||++|++|||+||||+++.+|||||...| ++.||++|||.+  
T Consensus        75 ~~~~dYInAs~I~----------~~~~~~~yI~tQ~P~~~t~~dFW~Mv~~~~~~~IVmlt~~~E~~~~kc~~YwP~~--  142 (568)
T c3sr9A_          75 IMGSDYINANYVD----------GYRRQNAYIATQGPLPETFGDFWRMVWEQRSATVVMMTRLEEKSRIKCDQYWPNR--  142 (568)
T ss_dssp             CTTTTEEEEEEEE----------ETTEEEEEEEECCCCGGGHHHHHHHHHHTTCCEEEECSCSEETTEESCCCCSCSS--
T ss_pred             CCCCCEEEEEECC----------CCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC--
T ss_conf             8877724532124----------8889832999719986679999999976499589995143027821000205688--


Q ss_pred             CCEEECCEEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC--CCCEEEEEEEEECC
Q ss_conf             8167464899999864101344431011001233344444533444346677717999999931--89608999974745
Q batch____       396 KPEVHGDISLTCTIERKVQRAVSDEVKAELEQEKTNRIAKGLVPEAELNGDGISYILRTLVMKK--GKDTREIRQLQYLT  473 (668)
Q Consensus       396 ~~~~~g~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~l~l~~--~~~~r~V~h~~yt~  473 (668)
                      +...||++.|++..+....                                  +|++|.+.++.  ++++|+|.||||++
T Consensus       143 ~~~~~g~~~V~~~~~~~~~----------------------------------~~~~r~l~i~~~~~~~~~~v~h~~y~~  188 (568)
T c3sr9A_         143 GTETYGFIQVTLLDTMELA----------------------------------TFCVRTFSLHKNGSSEKREVRHFQFTA  188 (568)
T ss_dssp             SEEEETTEEEEEEEEEECS----------------------------------SEEEEEEEEEESSCCCEEEEEEEEECC
T ss_pred             CCEEECCEEEEEEEEEEEC----------------------------------CEEEEEEEEEECCCCCEEEEEEEEECC
T ss_conf             8836553999999999719----------------------------------969999999976999708999997877


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             88888898868999999999999987411000257778868998589975404999999999999972987664899999
Q batch____       474 WPDHGCPLHPYAVLNFLEDVDREYDYFNAQPIAASLPQGPIVVHCSAGIGRTGTVLVLDALLNQVKKVGLLCPMDVYKMV  553 (668)
Q Consensus       474 WPD~gvP~~~~~lL~li~~V~~~~~~~~~~~~~~~~~~gPIVVHCSaGvGRTGTFiald~ll~ql~~~~~~~~vDI~~~V  553 (668)
                      |||+|+|.++..|+.|++.|++          ......+|||||||||+||||||||+|++++++++++   .+||+++|
T Consensus       189 Wpd~~~P~~~~~~l~~~~~v~~----------~~~~~~~PivVHCsaGvgRtGtfi~~d~~~~~l~~~~---~v~v~~~v  255 (568)
T c3sr9A_         189 WPDHGVPEYPTPFLAFLRRVKT----------CNPPDAGPIVVHCSAGVGRTGCFIVIDAMLERIKTEK---TVDVYGHV  255 (568)
T ss_dssp             CCSSSCCSCSHHHHHHHHHHHH----------SSCTTSCCEEEESSSSSSHHHHHHHHHHHHHHHTTSS---EECHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHH----------HCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCC---CCCHHHHH
T ss_conf             8888889988999999999986----------2687788689982998878899999999999988068---85899999


Q ss_pred             HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99997720125888999999999999997178530012014543222221012577644465454434566655444222
Q batch____       554 KYVRTYRSGLVQTEQQYQFLYKALAFYLKNNNPYPVKSFIDGDTDAFDFPRRLRPTPNASRPSSARQVTSSRPSSSASSR  633 (668)
Q Consensus       554 k~lR~qR~~mVqT~eQY~FiY~al~~Yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  633 (668)
                      +.||.||++||||.+||.|||++|++|+...++-...+.......................+........   +....+.
T Consensus       256 ~~lR~qR~~~Vqt~~QY~fiy~~l~e~~~~~~t~i~~~~~~~~~~~l~~~~~~~~~~~~~~ef~~l~~~~---~~~~~N~  332 (568)
T c3sr9A_         256 TLMRSQRNYMVQTEDQYGFIHEALLEAVGCGNTEVPARSLYTYIQKLAQVEPGEHVTGMELEFKRLAFIT---ASLPCNK  332 (568)
T ss_dssp             HHHHTTSTTSSCSHHHHHHHHHHHHHHHHSCCCCEEGGGHHHHHHHHTSCCTTCSSCHHHHHHHTTCCTT---TSCTTCT
T ss_pred             HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCC---CCCCCCC
T ss_conf             9999660022468499999999999998618875129999999998621478642002333103221235---7862000


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             23457767887676433444656641236666
Q batch____       634 TSHSRPRTGPQAEPIFERSTSSTSSSSTLLKS  665 (668)
Q Consensus       634 ~~~~~~~~~p~~~p~~~~stss~s~~~t~l~~  665 (668)
                      .....+.-.|--.-.+..+.......+++++|
T Consensus       333 ~KNR~~~i~p~d~~RV~L~~~~~~~~~dYINA  364 (568)
T c3sr9A_         333 FKNRLVNILPYESSRVCLQPIRGVEGSDYINA  364 (568)
T ss_dssp             TTCSCSSSCCCTTTBCCCCCCTTCTTCSCCSE
T ss_pred             CCCCCCCCCCCCCCEEEECCCCCCCCCCEEEE
T ss_conf             22788887865455345257788888773552


