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Job DescriptionG5EC24
Confidence100.00%DateFri May 3 21:06:01 BST 2013
Rank11Aligned Residues284
% Identity37%Templatec3s3fA_
PDB info PDB header:hydrolase/hydrolase inhibitorChain: A: PDB Molecule:tyrosine-protein phosphatase 10d; PDBTitle: crystal structure of the catalytic domain of ptp10d from drosophila2 melanogaster with a small molecule inhibitor vanadate
Resolution2.70 Å
Model Dimensions (Å)X:52.089 Y:64.619 Z:55.033

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   232.......240.........250.........260.........270.........280.........290.........300.........310.
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Query Sequence  LFNTFIEADLFVDRFEIIRRPINPRESMEKTGISEEFDRLSQEALPAEQYLSKREGRRPVNAEKNRYKNIVPFDHTRVIL
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Template Sequence  MASRPILIKNFAEHYRLMSAD. . . . . . . SDFRFSEEFEELKH. . . . VGRDQPCTFADLPCNRPKNRFTNILPYDHSRFKL
Template Known Secondary structure  SS


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   21........30.........40. ........50..... ....60.........70.........80.........
 
   312.......320.........330.........340.........350.........360.........370.........380. ........390
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Query Sequence  TDRPNTPGSDYINASYVRFENSQRTKNVTFACEKSFIATQGCLETTISDFWSMVWQENSRVIVMPTMENE. RKEKCARYW
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Template Sequence  QPVDDDEGSDYINANYVP. . . . . . . . . . GHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYW
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   90.........100....... ..110.........120.........130.........140.........150.........
 
   391........400.........410.........420.........430.........440.........450.........460.........470
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Query Sequence  PAEVNKPEVHGDISLTCTIERKVQRAVSDEVKAELEQEKTNRIAKGLVPEAELNGDGISYILRTLVMKKGKDTREIRQLQ
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Template Sequence  PND. TVPVFYGDIKVQILNDSHYA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DWVMTEFMLCRGSEQRILRHFH
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   160.. .......170.........180.. .......190.........200....
 
   471........480.........490.........500.........510.........520.........530.........540.........550
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Query Sequence  YLTWPDHGCPLHPYAVLNFLEDVDREYDYFNAQPIAASLPQGPIVVHCSAGIGRTGTVLVLDALLNQVKKVGLLCPMDVY
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Template Sequence  FTTWPDFGVPNPPQTLVRFVRAFRDR. . . . . . . . . . IGAEQRPIVVHCSAGVGRSGTFITLDRILQQINTSD. . . YVDIF
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   205....210.........220.........230 .........240.........250.........260...... ...270.
 
   551........560.........570.........580....
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Query Sequence  KMVKYVRTYRSGLVQTEQQYQFLYKALAFYLKNN
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Template Sequence  GIVYAMRKERVWMVQTEQQYICIHQCLLAVLEGK
Template Known Secondary structure  STTSS
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   272.......280.........290.........300.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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