Job Description G5EC24 Confidence 100.00% Date Fri May 3 21:06:01 BST 2013 Rank 13 Aligned Residues 287 % Identity 36% Template c2pa5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type 9; PDBTitle: crystal structure of human protein tyrosine phosphatase ptpn9 Resolution 1.60 Å Model Dimensions (Å) X:49.744 Y:66.058 Z:45.210

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		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	L	E	E	P	L	F	N	T	F	I	E	A	D	L	F	V	D	R	F	E	I	I	R	R	P	I	N	P	R	E	S	M	E	K	T	G	I	S	E	E	F	D	R	L	S	Q	E	A	L	P	A	E	Q	Y	L	S	K	R	E	G	R	R	P	V	N	A	E	K	N	R	Y	K	N	I	V	P	F	D
Query Conservation
Alig confidence								.	.	.																			.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation								.	.	.																			.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		V	H	V	P	G	P	.	.	.	H	A	M	T	I	Q	E	L	V	D	Y	V	N	A	R	Q	K	Q	.	.	.	.	.	.	.	.	.	.	G	I	Y	E	E	Y	E	D	I	R	R	E	N	P	V	G	T	.	.	.	.	F	H	C	S	M	S	P	G	N	L	E	K	N	R	Y	G	D	V	P	C	L	D
Template Known Secondary structure			B		S		S	.	.	.	S		B																.	.	.	.	.	.	.	.	.	.												S			S	S		.	.	.	.						S	T	T	T	G	G	G		S		T	T					T
Template Predicted Secondary structure								.	.	.																			.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
		278	.	280	.	.	.				.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.											.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.					.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		H	T	R	V	I	L	T	D	R	P	N	T	P	G	S	D	Y	I	N	A	S	Y	V	R	F	E	N	S	Q	R	T	K	N	V	T	F	A	C	E	K	S	F	I	A	T	Q	G	C	L	E	T	T	I	S	D	F	W	S	M	V	W	Q	E	N	S	R	V	I	V	M	P	T	M	E	N	E	.	R	K	E
Query Conservation																																																																														.
Alig confidence									.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																																											.
Template Conservation									.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	R	V	K	L	T	.	.	.	.	.	K	Q	T	D	Y	I	N	A	S	F	M	D	.	.	.	.	.	.	.	.	.	.	G	Y	K	Q	K	N	A	Y	I	G	T	Q	G	P	L	E	N	T	Y	R	D	F	W	L	M	V	W	E	Q	K	V	L	V	I	V	M	T	T	R	F	E	E	G	G	R	R
Template Known Secondary structure		T	T						.	.	.	.	.				S									.	.	.	.	.	.	.	.	.	.		B	T													G	G	G											T	T								S		S			T	T
Template Predicted Secondary structure									.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		341	.	.	.	.	.	.						.	.	350	.	.	.	.	.	.	.	.	.											360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.			.	460	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		K	C	A	R	Y	W	P	A	E	V	N	K	P	E	V	H	G	D	I	S	L	T	C	T	I	E	R	K	V	Q	R	A	V	S	D	E	V	K	A	E	L	E	Q	E	K	T	N	R	I	A	K	G	L	V	P	E	A	E	L	N	G	D	G	I	S	Y	I	L	R	T	L	V	M	K	.	.	K	G	K	D
Query Conservation																																																																												.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	C	G	Q	Y	W	P	L	E	K	D	S	R	I	R	F	G	F	L	T	V	T	N	L	G	V	E	N	M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Y	K	K	T	T	L	E	I	H	N	T	E	E	R	Q
Template Known Secondary structure							S			S	T	T						T	T												S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S											T	T	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440																																			.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	E	I	R	Q	L	Q	Y	L	T	W	P	D	H	G	C	P	L	H	P	Y	A	V	L	N	F	L	E	D	V	D	R	E	Y	D	Y	F	N	A	Q	P	I	A	A	S	L	P	Q	G	P	I	V	V	H	C	S	A	G	I	G	R	T	G	T	V	L	V	L	D	A	L	L	N	Q	V	K	K	V	G
Query Conservation
Alig confidence																																											.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		K	R	Q	V	T	H	F	Q	F	L	S	W	P	D	Y	G	V	P	S	S	A	A	S	L	I	D	F	L	R	V	V	R	N	Q	Q	S	L	A	V	S	N	.	.	.	.	M	G	A	E	P	P	I	V	V	H	C	S	A	G	I	G	R	T	G	T	F	C	S	L	D	I	C	L	A	Q	L	E	E	L	G
Template Known Secondary structure															S	S	S	S		S		S																					.	.	.	.												S	S	S	S																				S
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.					.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	C	P	M	D	V	Y	K	M	V	K	Y	V	R	T	Y	R	S	G	L	V	Q	T	E	Q	Q	Y	Q	F	L	Y	K	A	L	A	F	Y	L	K	N	N	N
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	T	L	N	V	F	Q	T	V	S	R	M	R	T	Q	R	A	F	S	I	Q	T	P	E	Q	Y	Y	F	C	Y	K	A	I	L	E	F	A	E	K	E	G
Template Known Secondary structure		.	.	.		B										T	T	T	S	T	T		S		S																		T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D