Job Description G5EC24 Confidence 100.00% Date Fri May 3 21:06:01 BST 2013 Rank 5 Aligned Residues 280 % Identity 42% Template c2nlkA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein tyrosine phosphatase, receptor type, g variant PDBTitle: crystal structure of d1 and d2 catalytic domains of human protein2 tyrosine phosphatase gamma (d1+d2 ptprg) Resolution 2.40 Å Model Dimensions (Å) X:54.631 Y:68.303 Z:41.752

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	E	A	D	L	F	V	D	R	F	E	I	I	R	R	P	I	N	P	R	E	S	M	E	K	T	G	I	S	E	E	F	D	R	L	S	Q	E	A	L	P	A	E	Q	Y	L	S	K	R	E	G	R	R	P	V	N	A	E	K	N	R	Y	K	N	I	V	P	F	D	H	T	R	V	I	L	T	D	R	P
Query Conservation
Alig confidence																			.	.	.	.	.	.	.															.	.
Template Conservation																			.	.	.	.	.	.	.															.	.
Template Sequence		A	I	P	V	K	Q	F	V	K	H	I	G	E	L	Y	S	N	.	.	.	.	.	.	.	N	Q	H	G	F	S	E	D	F	E	E	V	Q	R	.	.	C	T	A	D	M	N	I	T	A	E	H	S	N	H	P	E	N	K	H	K	N	R	Y	I	N	I	L	A	Y	D	H	S	R	V	K	L	R	P	L	P
Template Known Secondary structure					G	G	G												.	.	.	.	.	.	.															.	.	T	T	G	G	G					T	T	T	T	S	G	G	G	G	G	G		S	S	T	T					T	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.															.	.
Template SS confidence
		827	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.								.	.	.	.	.	.	850	.	.	.	.	.	.	.			.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		N	T	P	G	S	D	Y	I	N	A	S	Y	V	R	F	E	N	S	Q	R	T	K	N	V	T	F	A	C	E	K	S	F	I	A	T	Q	G	C	L	E	T	T	I	S	D	F	W	S	M	V	W	Q	E	N	S	R	V	I	V	M	P	T	M	E	N	E	.	R	K	E	K	C	A	R	Y	W	P	A	E	V
Query Conservation																																																																				.
Alig confidence			.	.	.											.	.	.	.	.	.	.	.	.	.																																											.													.
Template Conservation			.	.	.											.	.	.	.	.	.	.	.	.	.																																																								.
Template Sequence		H	.	.	.	S	D	Y	I	N	A	N	Y	V	D	.	.	.	.	.	.	.	.	.	.	G	Y	N	K	A	K	A	Y	I	A	T	Q	G	P	L	K	S	T	F	E	D	F	W	R	M	I	W	E	Q	N	T	G	I	I	V	M	I	T	N	L	V	E	K	G	R	R	K	C	D	Q	Y	W	P	T	E	.
Template Known Secondary structure			.	.	.	T	T									.	.	.	.	.	.	.	.	.	.		T	T													G	G	G												T								S		S			T	T								S		S	S	.
Template Predicted Secondary structure			.	.	.											.	.	.	.	.	.	.	.	.	.																																																								.
Template SS confidence
		903				.	.	.	.	.	.	910	.	.	.											.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.														460	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	K	P	E	V	H	G	D	I	S	L	T	C	T	I	E	R	K	V	Q	R	A	V	S	D	E	V	K	A	E	L	E	Q	E	K	T	N	R	I	A	K	G	L	V	P	E	A	E	L	N	G	D	G	I	S	Y	I	L	R	T	L	V	M	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	N	S	E	E	Y	G	N	I	I	V	T	L	K	S	T	K	I	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	Y	T	V	R	R	F	S	I	R	N	T	K	V	K	K	G	Q	K	G	N	P	K	G	R	Q
Template Known Secondary structure		.	S					T	T												S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S											T	T	S					T	T		T	T			T
Template Predicted Secondary structure		.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			969	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.																																			.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	R	E	I	R	Q	L	Q	Y	L	T	W	P	D	H	G	C	P	L	H	P	Y	A	V	L	N	F	L	E	D	V	D	R	E	Y	D	Y	F	N	A	Q	P	I	A	A	S	L	P	Q	G	P	I	V	V	H	C	S	A	G	I	G	R	T	G	T	V	L	V	L	D	A	L	L	N	Q	V	K	K	V
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		N	E	R	V	V	I	Q	Y	H	Y	T	Q	W	P	D	M	G	V	P	E	Y	A	L	P	V	L	T	F	V	R	R	S	S	A	A	.	.	.	.	.	.	.	.	.	.	R	M	P	E	T	G	P	V	L	V	H	C	S	A	G	V	G	R	T	G	T	Y	I	V	I	D	S	M	L	Q	Q	I	K	D	K
Template Known Secondary structure		T														S	S	S	S		S		S													T	.	.	.	.	.	.	.	.	.	.			S	S									S	S	S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1014	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.											.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	L	C	P	M	D	V	Y	K	M	V	K	Y	V	R	T	Y	R	S	G	L	V	Q	T	E	Q	Q	Y	Q	F	L	Y	K	A	L	A	F	Y	L	K	N	N	N	P
Query Conservation
Alig confidence			.	.	.
Template Conservation			.	.	.
Template Sequence		S	.	.	.	T	V	N	V	L	G	F	L	K	H	I	R	T	Q	R	N	Y	L	V	Q	T	E	E	Q	Y	I	F	I	H	D	A	L	L	E	A	I	L	G	K	E	T
Template Known Secondary structure		S	.	.	.												T	T	T	S	T	T	S	S																			S
Template Predicted Secondary structure			.	.	.
Template SS confidence
		1084				.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D