Job Description G5EC24 Confidence 100.00% Date Fri May 3 21:06:01 BST 2013 Rank 10 Aligned Residues 330 % Identity 33% Template c2jjdA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase epsilon; PDBTitle: protein tyrosine phosphatase, receptor type, e isoform Resolution 3.20 Å Model Dimensions (Å) X:57.636 Y:79.635 Z:54.520

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		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	I	I	R	R	P	I	N	P	R	E	S	M	E	K	T	G	I	S	E	E	F	D	R	L	S	Q	E	A	L	P	A	E	Q	Y	L	S	K	R	E	G	R	R	P	V	N	A	E	K	N	R	Y	K	N	I	V	P	F	D	H	T	R	V	I	L	T	D	R	P	N	T	P	G	S	D	Y	I	N	A
Query Conservation
Alig confidence									.	.	.	.	.	.	.													.	.	.	.																																										.
Template Conservation									.	.	.	.	.	.	.													.	.	.	.																																										.
Template Sequence		V	E	H	L	E	E	E	.	.	.	.	.	.	.	I	R	I	R	S	R	E	E	F	N	S	L	.	.	.	.	P	S	G	H	I	Q	G	T	F	E	L	A	N	K	E	E	N	R	E	K	N	R	Y	P	N	I	L	P	N	D	H	S	R	V	I	L	S	Q	L	G	I	.	P	C	S	D	Y	I	N	A
Template Known Secondary structure		G	G	G					.	.	.	.	.	.	.				T			T	T	G	G	G	S	.	.	.	.			T	T	S	S				T	T	T	T		G	G	G	G	G	G		S	S	T	T	S				S	S	S										.	T	T	T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.													.	.	.	.																																										.
Template SS confidence
		117	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		S	Y	V	R	F	E	N	S	Q	R	T	K	N	V	T	F	A	C	E	K	S	F	I	A	T	Q	G	C	L	E	T	T	I	S	D	F	W	S	M	V	W	Q	E	N	S	R	V	I	V	M	P	T	M	E	N	E	.	R	K	E	K	C	A	R	Y	W	P	A	E	V	N	K	P	E	V	H	G	D	I	S
Query Conservation																																																										.
Alig confidence						.	.	.	.	.	.	.	.	.	.																																											.													.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.																																																								.	.
Template Sequence		S	Y	I	D	.	.	.	.	.	.	.	.	.	.	G	Y	K	E	K	N	K	F	I	A	A	Q	G	P	K	Q	E	T	V	N	D	F	W	R	M	V	W	E	Q	K	S	A	T	I	V	M	L	T	N	L	K	E	R	K	E	E	K	C	H	Q	Y	W	P	D	Q	.	.	G	C	W	T	Y	G	N	I	R
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.		T	T													G	G	G											T	T								S		S			T	T				S				S		S	S	.	.	S					T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.																																																								.	.
Template SS confidence
		193	.	.	.											.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	C	T	I	E	R	K	V	Q	R	A	V	S	D	E	V	K	A	E	L	E	Q	E	K	T	N	R	I	A	K	G	L	V	P	E	A	E	L	N	G	D	G	I	S	Y	I	L	R	T	L	V	M	K	K	G	K	D	T	R	E	I	R	Q	L	Q	Y	L	T	W	P	D	H	G	C	P	L	H	P	Y
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		V	C	V	E	D	C	V	V	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	T	I	R	K	F	C	I	Q	P	K	A	.	P	R	L	V	S	Q	L	H	F	T	S	W	P	D	F	G	V	P	F	T	P	I
Template Known Secondary structure											S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									B				.														S	S	S			S		S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270																																			.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	L	N	F	L	E	D	V	D	R	E	Y	D	Y	F	N	A	Q	P	I	A	A	S	L	P	Q	G	P	I	V	V	H	C	S	A	G	I	G	R	T	G	T	V	L	V	L	D	A	L	L	N	Q	V	K	K	V	G	L	L	C	P	M	D	V	Y	K	M	V	K	Y	V	R	T	Y	R	S	G	L	V
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Sequence		G	M	L	K	F	L	K	K	V	K	T	L	.	.	.	.	.	.	.	.	.	.	N	P	V	H	A	G	P	I	V	V	H	C	S	A	G	V	G	R	T	G	T	F	I	V	I	D	A	M	M	A	M	M	H	A	E	Q	.	.	.	K	V	D	V	F	E	F	V	S	R	I	R	N	Q	R	P	Q	M	V
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	S		T	T									S	S	S	S	S																			S	.	.	.													T	T	S	T	T		S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.											.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.				360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	E	Q	Q	Y	Q	F	L	Y	K	A	L	A	F	Y	L	K	N	N	N	P	Y	P	V	K	S	F	I	D	G	D	T	D	A	F	D	F	P	R	R	L	R	P	T	P	N	A	S	R	P	S	S	A	R	Q	V	T	S	S	R	P	S	S	S	A	S	S	R	T	S	H	S	R	P	R	T	G	P	Q
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	D	M	Q	Y	T	F	I	Y	Q	A	L	L	E	Y	Y	L	Y	G	D	T	E	L	D	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	L	E	E	E	F	R	K	L	T	N	V	R	I	M	K	E	N	M	R	T	G	N	L	P	A	N	M	K	K	A	R	V	I
Template Known Secondary structure																				T							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	S				S	T	T						S					T	T		S	S	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.																			.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
		645	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	P	I	F	E	R	S	T	S	S	T	S	S	S	S	T	L	L	K	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	I	P	Y	D	F	N	R	V	I	L	S	M	Y	T	D	Y	I	N	A
Template Known Secondary structure		T	S				S	S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D