Job Description G5EC24 Confidence 100.00% Date Fri May 3 21:06:01 BST 2013 Rank 20 Aligned Residues 277 % Identity 40% Template c2c7sA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase kappa; PDBTitle: crystal structure of human protein tyrosine phosphatase2 kappa at 1.95a resolution Resolution 1.95 Å Model Dimensions (Å) X:51.530 Y:69.758 Z:39.358

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	E	A	D	L	F	V	D	R	F	E	I	I	R	R	P	I	N	P	R	E	S	M	E	K	T	G	I	S	E	E	F	D	R	L	S	Q	E	A	L	P	A	E	Q	Y	L	S	K	R	E	G	R	R	P	V	N	A	E	K	N	R	Y	K	N	I	V	P	F	D	H	T	R	V	I	L	T	D	R	P
Query Conservation
Alig confidence																			.	.	.	.	.	.	.													.	.	.	.	.																																					.	.
Template Conservation																			.	.	.	.	.	.	.													.	.	.	.	.																																					.	.
Template Sequence		A	I	R	V	A	D	L	L	Q	H	I	N	L	M	K	T	S	.	.	.	.	.	.	.	D	S	Y	G	F	K	E	E	Y	E	S	F	.	.	.	.	.	F	E	G	Q	S	A	S	W	D	V	A	K	K	D	Q	N	R	A	K	N	R	Y	G	N	I	I	A	Y	D	H	S	R	V	I	L	Q	.	.	P
Template Known Secondary structure					G	G	G									T	T		.	.	.	.	.	.	.	S	S	S								T	S	.	.	.	.	.			S			S							S	G	G	G	G	G	G		S	S	T	T	S				G	G	G	B					.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.													.	.	.	.	.																																					.	.
Template SS confidence
		867	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.								.	.	.	.	.	.	890	.	.	.	.	.						.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.			.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		N	T	P	G	S	D	Y	I	N	A	S	Y	V	R	F	E	N	S	Q	R	T	K	N	V	T	F	A	C	E	K	S	F	I	A	T	Q	G	C	L	E	T	T	I	S	D	F	W	S	M	V	W	Q	E	N	S	R	V	I	V	M	P	T	M	E	N	E	.	R	K	E	K	C	A	R	Y	W	P	A	E	V
Query Conservation																																																																				.
Alig confidence																.	.	.	.	.	.	.	.	.	.																																											.												.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.																																																							.	.
Template Sequence		V	D	P	S	S	D	Y	I	N	A	N	Y	I	D	.	.	.	.	.	.	.	.	.	.	G	Y	Q	R	P	S	H	Y	I	A	T	Q	G	P	V	H	E	T	V	Y	D	F	W	R	M	I	W	Q	E	Q	S	A	C	I	V	M	V	T	N	L	V	E	V	G	R	V	K	C	Y	K	Y	W	P	D	.	.
Template Known Secondary structure				G	G	G	G			S						.	.	.	.	.	.	.	.	.	.		T	T													G	G	G												T								S		S			T	T				S				S		S	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																																																							.	.
Template SS confidence
		933	.	.	.	.	.	.	940	.	.	.	.	.	.											.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460			.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		N	K	P	E	V	H	G	D	I	S	L	T	C	T	I	E	R	K	V	Q	R	A	V	S	D	E	V	K	A	E	L	E	Q	E	K	T	N	R	I	A	K	G	L	V	P	E	A	E	L	N	G	D	G	I	S	Y	I	L	R	T	L	V	M	K	K	G	.	.	K	D	T	R	E	I	R	Q	L	Q	Y	L
Query Conservation																																																																				.	.
Alig confidence		.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation		.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	D	T	E	V	Y	G	D	F	K	V	T	C	V	E	M	E	P	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	V	V	R	T	F	T	L	E	R	R	G	Y	N	E	I	R	E	V	K	Q	F	H	F	T
Template Known Secondary structure		.	S					T	T												S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S											T	T
Template Predicted Secondary structure		.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			1003	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.																																			.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	P	D	H	G	C	P	L	H	P	Y	A	V	L	N	F	L	E	D	V	D	R	E	Y	D	Y	F	N	A	Q	P	I	A	A	S	L	P	Q	G	P	I	V	V	H	C	S	A	G	I	G	R	T	G	T	V	L	V	L	D	A	L	L	N	Q	V	K	K	V	G	L	L	C	P	M	D	V	Y	K	M
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Sequence		G	W	P	D	H	G	V	P	Y	H	A	T	G	L	L	S	F	I	R	R	V	K	L	S	.	.	.	.	.	.	.	.	.	.	N	P	P	S	A	G	P	I	V	V	H	C	S	A	G	A	G	R	T	G	C	Y	I	V	I	D	I	M	L	D	M	A	E	R	E	G	.	.	.	V	V	D	I	Y	N	C
Template Known Secondary structure			S		S	S	S	S		S		S														.	.	.	.	.	.	.	.	.	.	S		T	T	S								S	S	S	S																				S	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template SS confidence
		1048	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.											.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.				.	.	1110	.	.	.	.
		553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	Y	V	R	T	Y	R	S	G	L	V	Q	T	E	Q	Q	Y	Q	F	L	Y	K	A	L	A	F	Y	L	K	N	N	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	A	L	R	S	R	R	I	N	M	V	Q	T	E	E	Q	Y	I	F	I	H	D	A	I	L	E	A	C	L	C	G	E	T
Template Known Secondary structure									S	T	T	S	S		S																			S	S
Template Predicted Secondary structure
Template SS confidence
		1115	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D