Job Description Q22070 Confidence 98.09% Date Sat Apr 13 12:57:32 BST 2013 Rank 185 Aligned Residues 119 % Identity 12% Template c3sibA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:ure3-bp sequence specific dna binding protein; PDBTitle: crystal structure of ure3-binding protein, wild-type Resolution 1.90 Å

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240								.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.
Query Sequence		L	H	K	H	F	L	S	L	M	S	P	A	N	D	A	V	A	R	K	H	M	K	P	F	V	Q	T	S	L	Q	F	K	V	Q	S	D	Q	L	Q	Q	V	T	E	D	.	.	.	.	.	.	.	Q	M	N	S	D	Q	F	S	F	A	S	R	Q	L	I	H	V	P	E	L	F	S	S	R	F	A	D	L	A
Query Conservation																																														.	.	.	.	.	.	.
Alig confidence																												.																		.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation																												.																																																	.	.	.	.	.
Template Sequence		I	Y	Q	W	F	M	G	V	D	R	D	R	S	G	T	L	E	I	N	E	L	M	M	G	Q	F	.	P	G	G	I	R	L	S	P	Q	T	A	L	R	M	M	R	I	F	D	T	D	F	N	G	H	I	S	F	Y	E	F	M	A	M	Y	K	F	M	E	L	A	Y	N	L	F	V	M	N	.	.	.	.	.
Template Known Secondary structure											T	T			S	S	B											.	G	G	G																	T	T		S	S		B																							.	.	.	.	.
Template Predicted Secondary structure																												.																																																	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	H	E	R	K	G	L	V	V	T	F	Q	N	F	L	R	F	L	D	G	K	Q	F	D	E	L	A	S	N	R	T	R	A	L	E	F	L	N	R	Y	F	Q	E	D	Q	A	Y	F	G	D	R	N	E	P	S	M	T	V	F	E	F	C	D	F	L
Query Conservation
Alig confidence		.	.																							.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation		.	.																							.	.	.															.	.	.	.	.	.	.	.	.
Template Sequence		.	.	D	R	N	R	S	G	T	L	E	P	H	E	I	L	P	A	L	Q	Q	L	G	F	.	.	.	Y	I	N	Q	R	T	S	L	L	L	H	R	L	F	.	.	.	.	.	.	.	.	.	A	R	G	M	A	F	C	D	L	N	C	W	I	A	I	C
Template Known Secondary structure		.	.		T	T			S				G	G	G									T		.	.	.															.	.	.	.	.	.	.	.	.	S	T	T		S	S
Template Predicted Secondary structure		.	.																							.	.	.															.	.	.	.	.	.	.	.	.
Template SS confidence
				127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.	.										.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D