Job Description Q22070 Confidence 99.46% Date Sat Apr 13 12:57:32 BST 2013 Rank 39 Aligned Residues 134 % Identity 20% Template c3nsjA_ PDB info PDB header:immune system Chain: A: PDB Molecule:perforin-1; PDBTitle: the x-ray crystal structure of lymphocyte perforin Resolution 2.75 Å

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		1081	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	C	G	Y	L	L	K	P	D	Y	M	L	T	D	D	F	D	P	T	N	T	E	K	F	A	T	A	Y	P	I	R	L	N	V	Q	V	I	G	G	R	H	L	S	R	K	D	K	N	K	G	I	C	S	P	F	V	E	I	E	I	I	G	M	P	C	D	T	K	V	F	Q	T	K	T	I	A	S	N	G
Query Conservation
Alig confidence																									.	.	.	.	.	.																.	.																.	.	.	.	.													.
Template Conservation																									.	.	.	.	.	.																.	.																.	.	.	.	.													.
Template Sequence		D	S	C	Q	C	E	C	Q	D	S	K	V	T	N	Q	D	C	C	P	R	Q	R	G	.	.	.	.	.	.	L	A	H	L	V	V	S	N	F	R	A	E	H	L	W	.	.	G	D	Y	T	T	A	T	D	A	Y	L	K	V	F	F	.	.	.	.	.	G	G	Q	E	F	R	T	G	V	V	W	N	.	N
Template Known Secondary structure			T	T					S		T	T	T	B		G	G	G		B	S	S	T	T	.	.	.	.	.	.													S			.	.		S	S		S											.	.	.	.	.	T	T								B		S	.
Template Predicted Secondary structure																									.	.	.	.	.	.																.	.																.	.	.	.	.													.
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.							.	.	.	.	.	.	.	420	.	.	.	.	.	.	.			.	.	430	.	.	.	.	.	.	.	.	.	440	.	.						.	.	.	.	.	.	.	450	.	.	.	.		.
		1161	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.		1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		L	N	P	I	W	N	Q	T	F	T	F	E	I	Q	C	P	E	V	A	.	L	I	R	F	H	V	E	D	G	D	F	V	G	P	K	T	D	P	F	I	G	Q	A	V	F	P	V	D	S	I	R	C	G	F	R	S	V	P	L	K	N	Q	Y	S	E	E	L	E	L	S	S	L	L	V	D	V	Q	M	C	S
Query Conservation																					.
Alig confidence																					.														.	.															.	.	.								.	.	.	.	.	.
Template Conservation																																			.	.															.	.	.								.	.	.	.	.	.
Template Sequence		N	N	P	R	W	T	D	K	M	D	F	E	N	V	L	L	S	T	G	G	P	L	R	V	Q	V	W	D	A	D	Y	G	W	.	.	D	D	D	L	L	G	S	C	D	R	S	P	H	S	.	.	.	G	F	H	E	V	T	C	.	.	.	.	.	.	E	L	N	H	G	R	V	K	F	S	Y	H	A	K	C
Template Known Secondary structure		S	S		B												T	T	T													S	S	S	.	.														S	.	.	.								.	.	.	.	.	.			S	S	S
Template Predicted Secondary structure																																			.	.															.	.	.								.	.	.	.	.	.
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.			.	490	.	.	.	.	.	.	.	.	.	500	.	.				.	.	.	.	.	.	.							510	.	.	.	.	.	.	.	.	.	520	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D