Job Description Q22070 Confidence 96.98% Date Sat Apr 13 12:57:32 BST 2013 Rank 415 Aligned Residues 131 % Identity 11% Template c3dd4A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:kv channel-interacting protein 4; PDBTitle: structural basis of kchip4a modulation of kv4.3 slow inactivation Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		194	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240								.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																.																																		.	.	.	.	.	.	.
Query SS confidence																.																																		.	.	.	.	.	.	.
Query Sequence		E	R	F	L	H	K	H	F	L	S	L	M	S	P	.	A	N	D	A	V	A	R	K	H	M	K	P	F	V	Q	T	S	L	Q	F	K	V	Q	S	D	Q	L	Q	Q	V	T	E	D	.	.	.	.	.	.	.	Q	M	N	S	D	Q	F	S	F	A	S	R	Q	L	I	H	V	P	E	L	F	S	S	R	F
Query Conservation																.																																		.	.	.	.	.	.	.
Alig confidence																.																																		.	.	.	.	.	.	.																.
Template Conservation																																																																								.
Template Sequence		K	K	E	L	Q	I	L	Y	R	G	F	K	N	E	C	P	S	G	V	V	N	E	E	T	F	K	E	I	Y	S	Q	F	F	P	Q	G	D	S	T	T	Y	A	H	F	L	F	N	A	F	D	T	D	H	N	G	A	V	S	F	E	D	F	I	K	G	L	S	I	L	L	.	R	G	T	V	Q	E	K	L	N
Template Known Secondary structure														T	T			S																S		S	S	S											T	T		S	S			S	S															.		S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	L	A	E	K	H	E	R	K	G	L	V	V	T	F	Q	N	F	L	R	F	L	D	G	K	Q	F	D	E	L	A	S	N	R	T	R	A	L	E	F	L	N	R	Y	F	Q	E	D	Q	A	Y	F	G	D	R	N	E	P	S	M	T	V	F	E	F	C	D	F	L
Query Conservation
Alig confidence																													.	.																				.	.	.	.	.	.	.	.
Template Conservation																													.	.																				.	.	.	.	.	.	.	.
Template Sequence		W	A	F	N	L	Y	D	I	N	K	D	G	Y	I	T	K	E	E	M	L	D	I	M	K	A	I	Y	.	.	D	M	M	G	P	R	Q	H	V	E	T	F	F	Q	K	M	D	K	N	.	.	.	.	.	.	.	.	K	D	G	V	V	T	I	D	E	F	I	E	S	C
Template Known Secondary structure									T	T		S	S			B													.	.							T											S	S	.	.	.	.	.	.	.	.		S	S	B
Template Predicted Secondary structure																													.	.																				.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.									.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D