Job Description Q22070 Confidence 99.60% Date Sat Apr 13 12:57:32 BST 2013 Rank 30 Aligned Residues 163 % Identity 20% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		601	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.		.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		V	T	E	E	W	F	H	G	R	C	E	R	D	E	A	K	K	R	I	L	E	H	K	E	K	G	N	G	L	F	M	I	R	D	S	N	L	F	I	G	D	F	S	L	S	I	L	H	D	G	K	V	.	H	H	V	R	I	R	S	K	I	I	D	K	E	K	K	Y	Y	F	M	D	N	K	V	C	D	T	L
Query Conservation																																																						.
Alig confidence									.														.	.	.	.											.																	.							.	.	.	.	.
Template Conservation									.														.	.	.	.											.																								.	.	.	.	.
Template Sequence		Y	K	H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	.	.	.	S	T	D	D	F	L	I	R	K	G	.	S	R	H	G	Y	C	V	L	V	I	K	F	A	S	D	V	F	V	H	M	K	I	E	.	.	.	.	.	E	H	S	E	H	Y	T	C	S	N	K	H	F	E	D	I
Template Known Secondary structure		G	G	S	T	T			.														.	.	.	.	S	S									.	S	S	T	T										T	T									.	.	.	.	.			S	S					T	T				S	S
Template Predicted Secondary structure									.														.	.	.	.											.																								.	.	.	.	.
Template SS confidence
		790	.	.	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.					810	.	.	.	.	.	.	.	.	.		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.						.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.
		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.		.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		Y	E	L	V	S	Y	Y	T	R	H	Y	L	T	T	A	H	F	K	M	V	L	T	I	P	C	P	Q	P	Q	P	H	L	N	Q	P	W	F	S	A	T	A	D	K	E	K	A	E	E	L	L	S	L	V	.	P	E	D	G	A	F	L	I	R	T	S	S	T	D	S	S	V	Y	V	L	S	L	K	V	D	G
Query Conservation																																																							.
Alig confidence															.	.										.	.	.	.	.	.	.	.	.	.	.					.	.													.
Template Conservation															.	.										.	.	.	.	.	.	.	.	.	.	.					.	.
Template Sequence		D	E	V	I	S	V	Y	V	R	P	I	L	R	.	.	N	L	K	S	I	K	A	H	A	.	.	.	.	.	.	.	.	.	.	.	K	Y	F	N	.	.	S	P	E	D	A	E	K	L	L	S	S	F	D	G	S	K	V	V	Y	A	F	Y	F	S	R	K	Y	P	G	K	L	T	F	A	Y	N	N	G	S
Template Known Secondary structure								T							.	.								S	T	.	.	.	.	.	.	.	.	.	.	.	T	B		S	.	.		T	T	T	S						T			S	S	S									S	S	S	T	T								S	S	S
Template Predicted Secondary structure															.	.										.	.	.	.	.	.	.	.	.	.	.					.	.
Template SS confidence
		859	860	.	.	.	.	.	.	.	.	.	870	.			.	.	.	.	.	.	.	.	880												.	.	.	.			.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.
		759	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	W	H	Y	R	L	K	R	D	G	R	I	F	V	V	N	Q	K	V	F	E	N	L	N	Q	I	V	E	F	Y	A	N
Query Conservation
Alig confidence													.	.
Template Conservation													.	.
Template Sequence		I	L	E	E	Y	I	G	V	S	D	M	.	.	L	T	Y	N	N	S	T	F	K	D	I	D	S	F	V	A	Y	R	K	R
Template Known Secondary structure										S	S	S	.	.				T	T				S	S
Template Predicted Secondary structure													.	.
Template SS confidence
		924	.	.	.	.	.	930	.	.	.	.			.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D