Job Description Q22070 Confidence 97.36% Date Sat Apr 13 12:57:32 BST 2013 Rank 347 Aligned Residues 125 % Identity 14% Template c2hpkA_ PDB info PDB header:luminescent protein Chain: A: PDB Molecule:photoprotein berovin; PDBTitle: crystal structure of photoprotein berovin from beroe2 abyssicola Resolution 2.00 Å

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230										.	.	.	.	.	.	.	.	.	240								.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		L	H	K	H	F	L	S	L	M	S	P	A	N	D	A	V	A	R	K	H	M	K	P	F	V	Q	T	S	L	Q	F	K	V	Q	.	.	.	.	.	.	.	.	.	S	D	Q	L	Q	Q	V	T	E	D	.	.	.	.	.	.	.	Q	M	N	S	D	Q	F	S	F	A	S	R	Q	L	.	.	.	.	.	.
Query Conservation																																				.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence																												.								.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																												.
Template Sequence		L	Y	K	R	F	D	T	F	D	L	D	S	D	G	K	X	E	X	D	E	V	L	Y	W	P	D	.	R	X	R	Q	L	V	N	A	T	D	E	Q	V	E	K	X	R	D	A	V	R	V	F	F	L	H	K	G	V	E	P	V	N	G	L	L	R	E	D	W	V	E	A	N	R	V	F	A	E	A	E	R	E
Template Known Secondary structure											T	T		S	S								T					.						S																					T	T		B	T	T	T	B			G	G	G
Template Predicted Secondary structure																												.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
					255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure		.	.	.																									.
Query SS confidence		.	.	.																									.
Query Sequence		.	.	.	I	H	V	P	E	L	F	S	S	R	F	A	D	L	A	E	K	H	E	R	K	G	L	V	.	V	T	F	Q	N	F	L	R	F	L	D	G	K	Q	F	D	E	L	A	S	N	R	T	R	A	L	E	F	L	N	R	Y	F	Q	E	D	Q	A	Y	F	G	D	R	N	E	P	S	M	T	V	F	E
Query Conservation		.	.	.																									.
Alig confidence		.	.	.																									.													.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		R	E	R	R	G	E	P	S	L	I	A	L	L	S	N	S	Y	Y	D	V	L	D	D	D	G	D	G	T	V	D	V	D	E	L	K	T	X	X	K	A	.	.	.	.	.	F	D	V	P	Q	E	A	A	Y	T	F	F	E	K	A	D	T	D	.	.	.	.	.	.	.	.	K	S	G	K	L	E	R	T	E
Template Known Secondary structure					T	T																		T	T		S	S	S	B												.	.	.	.	.	T	T	S		T	T											T	T	.	.	.	.	.	.	.	.			S	S	B
Template Predicted Secondary structure																																										.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.									.	.	.	.	.	180	.	.	.
		331	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	C	D	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	H	L	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D