Return to main results Retrieve Phyre Job Id

Job DescriptionQ22070
Confidence99.44%DateSat Apr 13 12:57:32 BST 2013
Rank45Aligned Residues106
% Identity23%Templatec2gsbA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:ras gtpase-activating protein 1; PDBTitle: solution structure of the second sh2 domain of human ras2 gtpase-activating protein 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   703......710.........720.........730.........740.........750.........760..... ....770.........780.
Predicted Secondary structure 























































.















Query SS confidence 






























































.















Query Sequence  PCPQPQPHLNQPWFSATADKEKAEELLSLVPEDGAFLIRTSSTDSSVYVLSLKVDGEFWHYRL. KRDGRIFVVNQKVFEN
Query Conservation 




  
 

 

    

  

  
 

 







 
    

 




    


  
.  


   


  
 
Alig confidence 






























































.















Template Conservation              

 
 


  

  
      
 



 
        


     
 
  
              
 
Template Sequence  SGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNS
Template Known Secondary structure 
SS


SGGG
SSB

SS
T

SS
SSSTT

SS
B



TTTSS

BS
Template Predicted Secondary structure 













































Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   782.......790.........800........
Predicted Secondary structure 




















Query SS confidence 


























Query Sequence  LNQIVEFYANREFVRGISLRFPVNEKD
Query Conservation 
 





   

 
   
  

 

 
Alig confidence 


























Template Conservation 
  

  
          
  


   
Template Sequence  IGDIIDHYRKEQIVEGYYLKEPVPMQD
Template Known Secondary structure  TTS
SBTTB









Template Predicted Secondary structure 














Template SS confidence 


























   86...90.........100.........110..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D