Phyre 2 alignment of Q22070 with c1fi5A

Job Description Q22070
Confidence 96.05% Date Sat Apr 13 12:57:32 BST 2013

Rank 495 Aligned Residues 60

% Identity 20% Template c1fi5A_

PDB info PDB header:contractile protein Chain: A: PDB Molecule:protein (troponin c); PDBTitle: nmr structure of the c terminal domain of cardiac troponin2 c bound to the n terminal domain of cardiac troponin i.

Resolution UNK

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240								.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.
Query Sequence	E	R	F	L	H	K	H	F	L	S	L	M	S	P	A	N	D	A	V	A	R	K	H	M	K	P	F	V	Q	T	S	L	Q	F	K	V	Q	S	D	Q	L	Q	Q	V	T	E	D	.	.	.	.	.	.	.	Q	M	N	S	D	Q	F	S	F	A	S	R	Q	L
Query Conservation																																																.	.	.	.	.	.	.
Alig confidence																														.																		.	.	.	.	.	.	.
Template Conservation																														.
Template Sequence	E	E	E	L	S	D	L	F	R	M	F	D	K	N	A	D	G	Y	I	D	L	E	E	L	K	I	M	L	Q	.	A	T	G	E	T	I	T	E	D	D	I	E	E	L	M	K	D	G	D	K	N	N	D	G	R	I	D	Y	D	E	F	L	E	F	M	K	G	V
Template Known Secondary structure													S	S		S	S													.	T	S	S	S																S	S	S	S	S	S											S
Template Predicted Secondary structure																														.
Template SS confidence
	94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

Download:

Text version

FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D