Job Description Q967F3 Confidence 99.20% Date Sat Apr 13 13:12:35 BST 2013 Rank 117 Aligned Residues 76 % Identity 21% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.		.	.	.	.	.	500	.	.	.	.							.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure																																																					.											.	.	.	.	.	.
Query SS confidence																																																					.											.	.	.	.	.	.
Query Sequence		S	Y	F	V	G	Q	P	T	K	D	S	M	V	Y	N	L	N	T	Q	P	E	G	A	F	V	I	R	Y	S	E	S	K	S	K	C	L	A	L	S	M	R	V	P	C	S	H	N	P	S	G	I	.	S	H	Y	L	I	I	R	N	E	Q	.	.	.	.	.	.	G	F	R	L	K	L	S	A	T	K	K	P
Query Conservation																																																					.											.	.	.	.	.	.
Alig confidence						.																																								.	.	.	.	.			.											.	.	.	.	.	.						.	.
Template Conservation						.																																								.	.	.	.	.																									.	.
Template Sequence		P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	.	.	.	.	.	D	L	F	Q	H	V	D	I	Q	E	L	E	K	E	N	P	L	A	L	G	K	V	L	V	.	.	V	E	G	Q	R
Template Known Secondary structure		T	T			.												T	T	S		T	T								S	S		T	T										T	.	.	.	.	.	T											S		S	S	T	T	S			S				.	.		T	T
Template Predicted Secondary structure						.																																								.	.	.	.	.																									.	.
Template SS confidence
		7	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.
		517	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	T	L	Q	M	M	L	T	H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	H	D	L	D	Q	I	I	V	E	Y
Template Known Secondary structure			S	S								T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D