Job Description Q967F3 Confidence 99.75% Date Sat Apr 13 13:12:35 BST 2013 Rank 34 Aligned Residues 117 % Identity 17% Template c3dxeC_ PDB info PDB header:protein binding Chain: C: PDB Molecule:amyloid beta a4 protein-binding family b member PDBTitle: crystal structure of the intracellular domain of human app2 (t668a mutant) in complex with fe65-ptb2 Resolution 2.00 Å

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		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.																			.																				.	.
Query SS confidence																	.																			.																				.	.
Query Sequence		S	W	N	V	Q	Y	I	G	S	F	P	I	S	G	S	.	Y	V	D	N	L	G	R	R	I	D	S	F	Q	P	T	T	S	G	.	G	M	Q	S	V	E	L	S	I	S	V	L	G	V	K	I	C	C	E	.	.	K	T	V	L	M	S	H	S	L	R	R	V	T	D	I	S	A	R	P	D	T	Q	N	I
Query Conservation																	.																			.																				.	.
Alig confidence																	.																			.																				.	.
Template Conservation
Template Sequence		K	F	Q	V	Y	Y	L	G	N	V	P	V	A	K	P	V	G	V	D	V	I	N	G	A	L	E	S	V	L	S	S	S	S	R	E	Q	W	T	P	S	H	V	S	V	A	P	A	T	L	T	I	L	H	Q	Q	T	E	A	V	L	G	E	C	R	V	R	F	L	S	F	L	A	V	G	R	D	V	H	T	F
Template Known Secondary structure														S		S																T			T	T	T	S									S	S							T	T	T									G	G	G								S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	V	A	T	E	P	V	G	R	T	Y	R	R	L	C	H	V	F	H	C	Q	S	L	K	E	A	E	E	I	E	N	V	L	R	N	A	N	Q	S	Q	V	L	A	A	K
Query Conservation
Alig confidence										.	.	.											.	.
Template Conservation										.	.	.											.	.
Template Sequence		A	F	I	M	A	A	G	P	.	.	.	A	S	F	C	C	H	M	F	W	C	.	.	E	P	N	A	A	S	L	S	E	A	V	Q	A	A	C	M	L	R	Y	Q	K	C	L
Template Known Secondary structure									T	.	.	.	T										.	.	S	S		S
Template Predicted Secondary structure										.	.	.											.	.
Template SS confidence
		622	.	.	.	.	.	.	.				630	.	.	.	.	.	.	.	.	.			640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D