Job Description Q967F3 Confidence 99.44% Date Sat Apr 13 13:12:35 BST 2013 Rank 109 Aligned Residues 110 % Identity 17% Template c3d8dA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family b member PDBTitle: crystal structure of the human fe65-ptb1 domain Resolution 2.20 Å

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.																	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.
Query Sequence		W	N	V	Q	Y	I	G	S	F	P	I	S	G	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	N	L	G	R	R	I	D	S	F	Q	P	T	T	S	G	G	M	Q	S	V	E	L	S	I	S	V	L	G	V	K	I	C	C	E	.	.	K	T	V	L	M	S	H	S	L	R	R
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.
Template Conservation
Template Sequence		F	A	V	R	S	L	G	W	V	E	M	T	E	E	E	L	A	P	G	R	S	S	V	A	V	N	N	C	I	R	Q	L	S	Y	H	K	N	N	L	H	D	P	M	S	G	G	W	G	E	G	K	D	L	L	L	Q	L	E	D	E	T	L	K	L	V	E	P	Q	S	Q	A	L	L	H	A	Q	P	I	I	S
Template Known Secondary structure														G	G	G	G	S	T	T	T													T	T								T	T	S	T	T		S	T	T									T	T							T	T	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		V	T	D	I	S	A	R	P	D	T	Q	N	I	.	G	Y	V	A	T	E	P	V	G	R	T	Y	R	R	L	C	H	V	F	H	C	Q	S	L	K	E	A	E	E	I	E	N	V	L	R	N	A	N	Q
Query Conservation															.
Alig confidence															.									.	.												.	.
Template Conservation																								.	.												.	.
Template Sequence		I	R	V	W	G	V	G	R	D	S	E	R	D	F	A	Y	V	A	R	D	K	L	.	.	T	Q	M	L	K	C	H	V	F	R	C	.	.	E	A	P	A	K	N	I	A	T	S	L	H	E	I	C	S
Template Known Secondary structure																						T	T	.	.	T											.	.	S	S
Template Predicted Secondary structure																								.	.												.	.
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.			.	.	.	.	.	.	.	.	480	.	.			.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D