Job Description Q967F3 Confidence 99.54% Date Sat Apr 13 13:12:35 BST 2013 Rank 102 Aligned Residues 108 % Identity 23% Template c2yt1A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:amyloid beta a4 protein and amyloid beta a4 PDBTitle: solution structure of the chimera of the c-terminal tail2 peptide of app and the c-terminal pid domain of fe65l Resolution UNK

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		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.													.																											.	.	.
Query SS confidence																		.													.																											.	.	.
Query Sequence		S	W	N	V	Q	Y	I	G	S	F	P	I	S	G	S	Y	.	V	D	N	L	G	R	R	I	D	S	F	Q	.	P	T	T	S	G	G	M	Q	S	V	E	L	S	I	S	V	L	G	V	K	I	C	C	E	K	T	.	.	.	V	L	M	S	H	S	L	R	R	V	T	D	I	S	A	R	P	D	T	Q	N
Query Conservation																		.													.																											.	.	.
Alig confidence																		.													.																											.	.	.
Template Conservation
Template Sequence		K	F	R	V	Q	Y	L	G	M	L	P	V	D	R	P	V	G	M	D	T	L	N	S	A	I	E	N	L	M	T	S	S	S	K	E	D	W	P	S	V	N	M	N	V	A	D	A	T	V	T	V	I	S	E	K	N	E	E	E	V	L	V	E	C	R	V	R	F	L	S	F	M	G	V	G	K	D	V	H	T
Template Known Secondary structure														S		S	S																S		T	T	T	S									T	T							S	S		S	S			S					T	T	T								S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	Y	V	A	T	E	P	V	G	R	T	Y	R	R	L	C	H	V	F	H	C	Q	S	L	K	E	A	E	E	I	E	N	V	L	R	N	A
Query Conservation
Alig confidence											.	.	.												.	.
Template Conservation											.	.	.												.	.
Template Sequence		F	A	F	I	M	D	T	G	N	.	.	.	Q	R	F	E	C	H	V	F	W	C	E	.	.	P	N	A	A	N	V	S	E	A	V	Q	A	A
Template Known Secondary structure									S	S	.	.	.	S										S	.	.	S		S
Template Predicted Secondary structure											.	.	.												.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D