Job Description Q967F3 Confidence 99.69% Date Sat Apr 13 13:12:35 BST 2013 Rank 65 Aligned Residues 151 % Identity 23% Template c2yszA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family PDBTitle: solution structure of the chimera of the c-terminal pid2 domain of fe65l and the c-terminal tail peptide of app Resolution UNK

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																												.																				.																			.	.	.
Query SS confidence																												.																				.																			.	.	.
Query Sequence		S	F	I	M	S	S	G	L	P	A	L	S	W	N	V	Q	Y	I	G	S	F	P	I	S	G	S	.	Y	V	D	N	L	G	R	R	I	D	S	F	Q	P	T	T	S	G	G	.	M	Q	S	V	E	L	S	I	S	V	L	G	V	K	I	C	C	E	.	.	.	K	T	V	L	M	S	H	S	L	R	R	V
Query Conservation																												.																				.																			.	.	.
Alig confidence																												.																				.																			.	.	.
Template Conservation
Template Sequence		S	G	P	T	P	K	T	E	L	V	Q	K	F	R	V	Q	Y	L	G	M	L	P	V	D	R	P	V	G	M	D	T	L	N	S	A	I	E	N	L	M	T	S	S	S	K	E	D	W	P	S	V	N	M	N	V	A	D	A	T	V	T	V	I	S	E	K	N	E	E	E	V	L	V	E	C	R	V	R	F	L
Template Known Secondary structure																									S	S	S	S																S		T	T	T	S									T	T							S	S		S	S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		T	D	I	S	A	R	P	D	T	Q	N	I	G	Y	V	A	T	E	P	V	G	R	T	Y	R	R	L	C	H	V	F	H	C	Q	S	L	K	E	A	E	E	I	E	N	V	L	R	N	A	N	Q	S	Q	V	L	A	A	K	Q	.	.	P	K	S	A	V	S	T	S	S	M	H	P	T	N	T	A	S	T	M
Query Conservation																																																													.	.
Alig confidence																						.	.	.														.	.														.								.	.
Template Conservation																						.	.	.														.	.														.
Template Sequence		S	F	M	G	V	G	K	D	V	H	T	F	A	F	I	M	D	T	G	N	.	.	.	Q	R	F	E	C	H	V	F	W	C	E	P	N	.	.	A	A	N	V	S	E	A	V	Q	A	A	C	S	.	G	P	S	S	G	I	E	G	R	G	S	S	G	S	S	G	S	S	G	S	S	G	D	A	A	V	T	P
Template Known Secondary structure								S	S	T	T								S	S	S	.	.	.	S										S	S		.	.	S	T	T											.	S												S			S	S		S	S	S		S
Template Predicted Secondary structure																						.	.	.														.	.														.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		286	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	R	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D