Job Description Q967F3 Confidence 99.76% Date Sat Apr 13 13:12:35 BST 2013 Rank 28 Aligned Residues 117 % Identity 18% Template c2dyqA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family b member PDBTitle: crystal structure of the c-terminal phophotyrosine interaction domain2 of human apbb3 Resolution 3.10 Å Model Dimensions (Å) X: Y: Z:

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																													.									.	.
Query SS confidence																																													.									.	.
Query Sequence		W	N	V	Q	Y	I	G	S	F	P	I	S	G	S	Y	V	D	N	L	G	R	R	I	D	S	F	Q	P	T	T	S	G	G	M	Q	S	V	E	L	S	I	S	V	.	L	G	V	K	I	C	C	E	.	.	K	T	V	L	M	S	H	S	L	R	R	V	T	D	I	S	A	R	P	D	T	Q	N	I	G	Y
Query Conservation																																													.									.	.
Alig confidence																																													.									.	.
Template Conservation
Template Sequence		Y	E	A	L	Y	X	G	T	L	P	V	T	K	A	X	G	X	D	V	L	N	E	A	I	G	T	L	T	A	R	G	D	R	N	A	W	V	P	T	X	L	S	V	S	D	S	L	X	T	A	H	P	I	Q	E	E	P	L	W	Q	C	P	V	R	L	V	T	F	I	G	V	G	R	D	P	H	T	F	G	L
Template Known Secondary structure													S	S	S																		S	S												S	S												S	S				G	G	G								S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	T	E	P	V	G	R	T	Y	R	R	L	C	H	V	F	H	C	Q	S	L	K	E	A	E	E	I	E	N	V	L	R	N	A	N	Q	S	Q	V	L	A	A	K	Q
Query Conservation
Alig confidence								.	.	.											.	.
Template Conservation								.	.	.											.	.
Template Sequence		I	A	D	L	G	R	.	.	.	Q	S	F	Q	C	A	A	F	W	C	.	.	Q	P	H	A	G	G	L	S	E	A	V	Q	A	A	C	X	V	Q	Y	Q	K	C	L	V
Template Known Secondary structure						S	S	.	.	.	S										.	.	S	S		T
Template Predicted Secondary structure								.	.	.											.	.
Template SS confidence
		377	.	.	380	.	.				.	.	.	.	.	.	.	390	.	.			.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D