Job Description Q20196 Confidence 5.68% Date Fri May 3 21:41:44 BST 2013
Rank 24 Aligned Residues 71
% Identity 18% Template c3j20E_
PDB info
PDB header: ribosomeChain: E: PDB Molecule: 30s ribosomal protein s4e;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
Resolution 6.60 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
47 . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
Y R V V V D T K N P V K I I I S K I M F V Y L Q P P A I R V S V A S E N A S L K H I L A V T V V R G K T V H N I A L S R L Q S H R N K Q Y E Y W F A T D T L C D
Query Conservation  
                                                               
Alig confidence  
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Template Conservation  
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Template Sequence  
Y R V L P N R I G .
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K L I L H P I S E D E A F I K .
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P L R I R N K R M I K G A R V Q L N F H D G T N H I V .
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S I
Template Known Secondary structure  
S S S . . . . . . . . . . . . . . . . T T T T T . . . . S T T T S S . . . . . . . S S
Template Predicted Secondary structure  
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Template SS confidence  
   
100 . . . . . . . .
. 110 . . . . . . . . . 120 . . .
. . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150
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127 . . 130 . . . . . . . . . 140 . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
N D R S I E Q R G Q P V H V S V S S
Query Conservation  
           
Alig confidence  
Template Conservation  
                       
Template Sequence  
A E K D N Y F T S Y T V L M K V P E
Template Known Secondary structure  
S S S S S S T T T
Template Predicted Secondary structure  
Template SS confidence  
   
153 . . . . . . 160 . . . . . . . . . 170
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
 
Phyre2 is part of Genome3D