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Job DescriptionQ20196
Confidence2.48%DateFri May 3 21:41:44 BST 2013
Rank69Aligned Residues55
% Identity20%Templatec3izbD_
PDB info PDB header:ribosomeChain: D: PDB Molecule:40s ribosomal protein rps4 (s4e); PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
Resolution8.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.........90.........100.........110.........120.
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Query Sequence  YRVVVDTKNPVKIIISKIMFVYLQPPAIRVSVASENASLKHILAVTVVRGKTVHNIALSRLQSHRNKQYEYWFAT
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Template Sequence  FRLVYDVKG. . . . . . . . . . . . . . . . RFAVHRITDEEASYK. . . . LGKVKKVQLGKKGVPYVVTHDGRTIRYPDPN
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   99100....... ..110.........120.. .......130.........140.........150...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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