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Job DescriptionQ20196
Confidence5.68%DateFri May 3 21:41:44 BST 2013
Rank24Aligned Residues71
% Identity18%Templatec3j20E_
PDB info PDB header:ribosomeChain: E: PDB Molecule:30s ribosomal protein s4e; PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
Resolution6.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.........90.........100.........110.........120......
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Query Sequence  YRVVVDTKNPVKIIISKIMFVYLQPPAIRVSVASENASLKHILAVTVVRGKTVHNIALSRLQSHRNKQYEYWFATDTLCD
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Template Sequence  YRVLPNRIG. . . . . . . . . . . . . . . . KLILHPISEDEAFIK. . . . PLRIRNKRMIKGARVQLNFHDGTNHIV. . . . . . . SI
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   100........ .110.........120... ......130.........140.........150 ..
 
   127..130.........140....
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Query Sequence  NDRSIEQRGQPVHVSVSS
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Template Sequence  AEKDNYFTSYTVLMKVPE
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   153......160.........170
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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