Job Description G5EC32 Confidence 99.63% Date Sat Apr 13 13:16:31 BST 2013 Rank 163 Aligned Residues 54 % Identity 33% Template c3rebD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: hiv-1 nef protein in complex with engineered hck-sh3 domain Resolution 3.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	R	A	V	Y	P	Y	Q	P	Q	K	E	D	E	L	Q	L	Y	T	N	D	I	I	F	V	V	E	K	C	D	D	G	W	F	I	G	T	S	L	R	T	G	D	F	G	I	F	P	G	N	Y	V	K	R
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		I	V	V	A	L	Y	D	Y	V	S	W	S	P	D	D	L	S	F	Q	K	G	D	Q	M	V	V	L	E	E	S	G	.	E	W	W	K	A	R	S	L	A	T	R	K	E	G	Y	I	P	S	N	Y	V	A	R
Template Known Secondary structure						S	S		B			S	S	T	T	B			B		T	T									S	S	.	S							T	T	T								G	G	G
Template Predicted Secondary structure																																	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D