 |
| Job Description | G5EC32 | | Confidence | 31.09% | Date | Sat Apr 13 13:16:31 BST 2013 |
| Rank | 301 | Aligned Residues | 37 |
| % Identity | 19% | Template | c3ceyA_ |
| PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:lethal(3)malignant brain tumor-like 2 protein; |
PDBTitle: crystal structure of l3mbtl2
|
| Resolution | 2.20 Å |
|
 |
|   |   |
966 | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | L | Y | T | N | D | I | I | F | V | V | E | K | C | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | G | W | F | I | G | T | S | L | R | T | G | D | F | G | I | F | P | G | N | Y | V | K | R | H |
| Query Conservation |   |
  |   |   |   |
|
|   |
|   |
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |   |
|   |   |   |   |   |
|   |   |
|   |
|
|   |
|
|
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   | . | . | . |   |
|   |   |
|   |
|
|
|
|
|   |
|   |
| Template Sequence |   |
W | F | E | E | G | M | K | L | E | A | I | D | P | L | N | L | G | N | I | C | V | A | T | V | C | K | V | L | L | D | G | Y | L | M | I | C | V | D | D | W | F | C | Y | H | A | . |
. |
. |
S | S | H | A | I | F | P | A | T | F | C | Q | K | N |
| Template Known Secondary structure |   |
|
|
| T | T |
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |
|
|
|  |  |  |  | T | . | . | . | T |
| S | S |  |  |  | T | T |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
| . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
427 | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | |
|
|
. | . | . | . | . | . | . | . | 480 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|