Return to main results Retrieve Phyre Job Id

Job DescriptionG5EC32
Confidence99.77%DateSat Apr 13 13:16:31 BST 2013
Rank12Aligned Residues82
% Identity17%Templatec2yt6A_
PDB info PDB header:cell cycleChain: A: PDB Molecule:adult male urinary bladder cdna, riken full- PDBTitle: solution structure of the sh3_1 domain of yamaguchi sarcoma2 viral (v-yes) oncogene homolog 1
ResolutionUNK
Model Dimensions (Å)X: Y: Z:

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   923......930.........940.........950.........960.........970.........980.........990.........1000..
Predicted Secondary structure 


























































Query SS confidence 















































































Query Sequence  LNDEPKNPKKDTNILMNAASLIPKGSEMYRAVYPYQPQKEDELQLYTNDIIFVVEKCDDGWFIGTSLRTGDFGIFPGNYV
Query Conservation                                


 
     


    

 
 
  
  


  
     
  
 

 


Alig confidence 















































































Template Conservation 


    
 
     
              

 

 
    


   

 
 

      

       
  
 


 

Template Sequence  SSGSSGASSSFSVVSSSYPTGLTGGVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKSGYIPSNYV
Template Known Secondary structure 


















SS

SS

SS



SSTTS



TT

S
TT
SSS


TTT
Template Predicted Secondary structure 
















































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   1003.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  KR
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  VP
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   82.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D