 |
| Job Description | G5EC32 | | Confidence | 91.78% | Date | Sat Apr 13 13:16:31 BST 2013 |
| Rank | 236 | Aligned Residues | 85 |
| % Identity | 6% | Template | c2bkdN_ |
| PDB info |
PDB header:nuclear protein | Chain: N: PDB Molecule:fragile x mental retardation 1 protein; |
PDBTitle: structure of the n-terminal domain of fragile x mental2 retardation protein
|
| Resolution | UNK |
|
 |
|   |   |
710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | |
|
|
|
. | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
| Query Sequence |   |
I | R | I | I | R | E | V | D | G | Y | W | M | E | G | E | R | N | G | R | S | G | I | F | P | T | S | Y | V | Q | I | N | T | G | N | Q | G | D | S | Q | K | M | R | A | I | Y | P | F | T | A | R | S | D | T | E | L | S | L | K | R | G | E | I | I | T | R | R | R | Q | I | D | S | . |
. |
. |
. |
N | W | L | E | G |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |
|   |
|   |   |   |   |
|   | . | . | . | . |   |
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| Template Conservation |   |
|
|
|   |
|   | . |
|
|
|   |
|   |
|   |
|   |   |
|   |
|   |   |   |
|   |
|   |
|   |   |   |   |
|   |   |
|
|   |
|
|
| . | . | . | . |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |
|   |   |
|   |
|
|   |
|
|
|   |
|
| Template Sequence |   |
V | E | V | R | G | S | . |
N | G | A | F | Y | K | A | F | V | K | D | V | E | D | S | I | T | V | A | F | E | N | N | W | Q | P | D | R | Q | I | P | F | D | V | R | . |
. |
. |
. |
F | P | P | P | V | G | Y | N | K | D | I | N | E | S | D | E | V | E | V | Y | S | R | A | N | E | K | E | P | C | C | W | W | L | A |
| Template Known Secondary structure |   |
 |  |  |  | S | S | . | S | S | S |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
| S | S | S |
|
|
|  |  |  |  |
|
|  |  | . | . | . | . |
|
|
|
| S | S |
|
|
|
|
|
| S | S |
|  |  |  |  |
|
|
| S | B | T | T | B |
|
|
|
|  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
6 | . | . | . | 10 | . | |
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
|   |
|   |   |
786 | . | . | . | 790 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | N | Q | I | G | I | V | G | I | F | P | A | S | Y |
| Query Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |   |
|
|   |   |   |   |
|   |
|
| Template Sequence |   |
K | V | R | M | I | K | G | E | F | Y | V | I | E | Y |
| Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|