Job Description G5EC32 Confidence 30.39% Date Sat Apr 13 13:16:31 BST 2013 Rank 306 Aligned Residues 93 % Identity 11% Template c1se8A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:single-strand binding protein; PDBTitle: structure of single-stranded dna-binding protein (ssb) from d.2 radiodurans Resolution 1.80 Å

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		689	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	V	Y	K	F	E	P	R	S	A	R	E	L	P	L	N	R	G	D	I	I	R	I	I	R	E	V	D	G	Y	W	M	E	G	E	R	N	G	R	S	G	I	F	P	T	S	Y	V	Q	I	N	T	G	N	Q	G	D	S	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.
Template Sequence		V	S	I	L	G	K	P	A	E	W	Q	A	E	R	N	L	K	G	G	D	A	V	V	V	E	G	T	L	E	Y	R	Q	W	E	.	.	.	K	R	S	A	V	N	V	K	A	L	R	X	E	Q	L	G	T	Q	P	E	L	I	Q	D	A	G	G	G	V	R	X	S	G	A	X	N	E	V	L	V	L	G	N
Template Known Secondary structure						S									T				T	T																.	.	.																S	S								T	T	S						T
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
																																									750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	R	A	I	Y	P	F	T	A	R	S	D	T	E	L	S	L	K	R	G	E	I	I	T	R	R	R	Q	I	D	S	N	W	L	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	R	D	P	E	I	R	Y	T	P	A	G	D	A	V	L	S	L	S	I	A	V	N	E	N	Y	Q	D	R	Q	G	Q	R	Q	E	K	V	H	Y	I	D	A	T	L	W	R	D	L	A	E	N	X	K	E	L	R	K	G	D	P	V	X	I	X	G	R	L	V	N	E	G	W	T
Template Known Secondary structure				S								T	T																		T	T	S															T							T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D