Phyre 2 alignment of Q20646 with c3okzB

Job Description Q20646
Confidence 18.18% Date Fri May 3 21:47:31 BST 2013

Rank 45 Aligned Residues 66

% Identity 24% Template c3okzB_

PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative uncharacterized protein gbs0355; PDBTitle: crystal structure of protein gbs0355 from streptococcus agalactiae,2 northeast structural genomics consortium target sar127

Resolution 2.70 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	125	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence	Q	V	V	L	D	S	Q	K	Y	E	Y	L	R	V	R	.	T	E	E	E	Q	Q	L	V	I	E	K	R	A	R	E	R	F	I	R	K	S	M	K	I	A	E	E	T	A	L	S	Y	E	N	D	G	S	R	E	L	S	E	T	M	T	Q	K	V	T	Q	M	D	F	T	E	T	N	V	P	F	D
Query Conservation																.
Alig confidence																.																														.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.
Template Sequence	H	K	I	N	G	E	Q	A	L	V	Y	S	R	X	R	Y	D	D	P	E	G	D	Y	G	R	Q	K	R	Q	R	E	V	I	Q	K	V	L	K	K	I	L	A	L	N	S	.	.	.	.	.	.	.	.	.	.	I	S	S	Y	K	K	I	L	S	A	V	S	N	N	X	Q	T	N	I	E	I	K
Template Known Secondary structure			B									T	T			T	T		T	T	T																									.	.	.	.	.	.	.	.	.	.												S	T	T				S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
	198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.											.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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