Job Description Q45FX5 Confidence 98.15% Date Fri May 3 21:26:37 BST 2013 Rank 285 Aligned Residues 315 % Identity 13% Template c4h8sA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:dcc-interacting protein 13-beta; PDBTitle: crystal structure of human appl2barph domain Resolution 3.50 Å

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		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.					.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																																			.	.	.	.
Query SS confidence																																																			.	.	.	.
Query Sequence		T	L	K	R	N	R	C	I	R	E	L	Y	D	T	E	K	N	Y	V	A	Q	A	L	V	T	I	I	K	T	F	Y	E	P	L	K	G	I	I	P	T	S	D	Y	N	I	I	F	G	N	.	.	.	.	I	E	E	I	N	V	L	H	T	A	L	L	A	D	L	E	Y	P	V	K	V	A	L	G	L	S	D
Query Conservation																																																			.	.	.	.
Alig confidence																					.																														.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																					.																																																						.	.	.	.	.	.	.
Template Sequence		T	N	Q	L	L	Q	A	M	Q	R	V	Y	G	A	Q	N	E	M	C	.	L	A	T	Q	Q	L	S	K	Q	L	L	A	Y	E	K	Q	N	F	A	D	E	E	V	I	S	T	L	H	Y	F	S	K	V	V	D	E	L	N	L	L	H	T	E	L	A	K	Q	L	A	D	T	M	V	.	.	.	.	.	.	.
Template Known Secondary structure																					.											T	T	G	G	G	S																																				T		.	.	.	.	.	.	.
Template Predicted Secondary structure																					.																																																						.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	P	P	R	P	I	S	L	N	E	C	V	P	Q	T	I	G	E	V	F	I	K	Y	R	D	Q	F	L	A	Y	G	K	Y	C	S	N	L	P	D	S	R	K	L	S	N	E	L	L	K	T	N	E	F	I	S	R	N	I	N	E	L	T	A	Q	G	N	C	K	F	G	M	N	D	L	L	C	V	P	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	L	P	I	I	Q	F	R	E	K	D	L	T	E	V	S	T	L	K	D	L	F	G	L	A	S	N	E	H	D	L	S	M	A	K	Y	S	R	L	P	K	K	K	E	N	E	K	V	K	T	E	V	G	K	E	V	A	A	A	R	R	K	Q	H	L	S	S	L	Q	Y	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.									T																													S		S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		394	.	.	.	.						.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.						.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure							.	.	.	.	.																											.	.	.	.	.																																					.	.	.
Query SS confidence							.	.	.	.	.																											.	.	.	.	.																																					.	.	.
Query Sequence		Q	R	L	T	K	.	.	.	.	.	Y	P	L	L	L	K	E	L	Q	K	K	T	D	L	A	S	P	D	R	K	S	L	E	E	A	V	.	.	.	.	.	E	V	M	E	D	V	C	N	Y	I	N	E	E	S	R	D	T	N	A	I	K	V	I	D	E	I	E	Q	S	I	T	D	L	S	M	P	.	.	.
Query Conservation							.	.	.	.	.																											.	.	.	.	.																																					.	.	.
Alig confidence							.	.	.	.	.																											.	.	.	.	.																																					.	.	.
Template Conservation
Template Sequence		C	A	L	N	A	L	Q	Y	R	K	Q	M	A	M	M	E	P	M	I	G	F	A	H	G	Q	I	N	F	F	K	K	G	A	E	M	F	S	K	R	M	D	S	F	L	S	S	V	A	D	M	V	Q	S	I	Q	V	E	L	E	A	E	A	E	K	M	R	V	S	Q	Q	E	L	L	S	V	D	E	S	V	Y
Template Known Secondary structure																																					S																																							S		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
							461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	L	N	V	K	L	H	D	Y	G	R	V	N	L	D	G	E	V	K	M	A	E	S	T	L	T	Q	A	G	K	P	K	Q	R	Y	I	F	L	F	D	K	V	I	V	V	C	K	A	A	N	K	V	M	A	A	K	T	T	G	A	S	A	R	T	N	T	F	T	Y	K	N	A	Y	V	M	S
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	D	S	D	V	A	A	P	Q	I	N	R	N	L	I	Q	K	A	G	Y	L	N	L	R	N	K	T	G	L	V	T	T	T	W	E	R	L	Y	F	F	T	Q	G	G	N	L	M	C	Q	P	R	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	G	G	L	I	Q	D	L	D	N	C
Template Known Secondary structure			T	T	S		S	S	S						S		S													S	S	S													S	S							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S					B		S	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.															.	.	.	320	.	.	.	.	.	.	.	.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	T	I	D	K	N	A	S	L	D	V	K	S	G	G	T	I	T	R	R	T	Q	Y	V	I	I	M	T	R	D	R	N	E	N	N	E	I	T	Q	L	T	F	Y	F	K	N	E	A	T	R	N	N	W	M	T	A	L	L	L	S	K	S	N	V
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Sequence		S	V	M	A	V	D	C	E	D	R	R	.	.	.	.	.	.	.	.	.	.	.	.	Y	C	F	Q	I	T	.	.	.	.	T	P	N	G	K	S	G	I	I	L	Q	A	E	S	R	K	E	N	E	E	W	I	C	A	I	N	N	I	S	R	Q	I
Template Known Secondary structure									T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	S						.	.	.	.		T	T	S	S								S	S	S															S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.													340	.	.	.	.	.					.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D