Job Description Q45FX5 Confidence 100.00% Date Fri May 3 21:26:37 BST 2013 Rank 15 Aligned Residues 293 % Identity 18% Template c4h6yA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ferm, rhogef and pleckstrin domain-containing protein 1; PDBTitle: crystal strucure of the dh-ph-ph domain of farp1 Resolution 4.09 Å Model Dimensions (Å) X: Y: Z:

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		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		L	K	R	N	R	C	I	R	E	L	Y	D	T	E	K	N	Y	V	A	Q	A	L	V	T	I	I	K	T	F	Y	E	P	L	K	.	.	G	I	I	P	T	S	D	Y	N	I	I	F	G	N	I	E	E	I	N	V	L	H	T	A	L	L	A	D	L	E	Y	P	V	K	V	A	L	G	L	S	D	A	T	P
Query Conservation																																				.	.
Alig confidence																						.														.	.																																				.	.	.	.	.	.	.	.	.
Template Conservation																						.																																																			.	.	.	.	.	.	.	.	.
Template Sequence		D	K	A	Y	F	I	A	K	E	V	S	T	T	E	R	T	Y	L	K	D	.	L	E	V	I	T	S	W	F	Q	S	T	V	S	K	E	D	A	M	P	E	A	L	K	S	L	I	F	P	N	F	E	P	L	H	K	F	H	T	N	F	L	K	E	I	E	Q	R	L	A	L	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S																				.														T	T	T		S									S	T	T	T																					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.		.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	P	I	S	L	N	E	C	V	P	Q	T	I	G	E	V	F	I	K	Y	R	D	Q	F	L	A	Y	G	K	Y	C	S	N	L	P	D	S	R	K	L	S	N	E	L	L	K	T	N	E	F	I	S	R	N	I	N	E	L	T	A	Q	G	N	C	K	F	G	M	N	D	L	L	C	V	P	F	Q	R	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	W	E	G	D	V	M	L	K	N	I	Q	G	M	K	H	L	A	A	H	L	W	K	H	S	E	A	L	E	A	L	E	N	G	I	K	S	S	R	R	L	E	N	F	C	R	D	F	E	L	Q	K	V	C	Y	L	P	L	N	T	F	L	L	R	P	L	H	R	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.													G	G	G	S					T	T											T	T	T	T													T	S	S	S			S		G	G	G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	Y	P	L	L	L	K	E	L	Q	K	K	T	D	L	A	S	P	D	R	K	S	L	E	E	A	V	E	V	M	E	D	V	C	N	Y	I	N	E	E	S	R	D	T	N	A	I	K	V	I	D	E	I	E	Q	S	I	T	D	L	S	M	P	L	N	V	K	L	H	D	Y	G	R	V	N	L	D	G	E
Query Conservation
Alig confidence																							.	.	.	.	.	.																																					.	.	.	.	.
Template Conservation																							.	.	.	.	.	.																																					.	.	.	.	.
Template Sequence		M	H	Y	K	Q	V	L	E	R	L	C	K	H	H	P	R	D	C	R	A	A	.	.	.	.	.	.	L	A	E	I	T	E	M	V	A	Q	L	H	G	T	M	I	K	M	E	N	F	Q	K	L	H	E	L	K	K	D	L	I	G	I	D	L	.	.	.	.	.	V	V	P	G	R	E	F	I	R	L	G	S
Template Known Secondary structure																							.	.	.	.	.	.											T	T	T													T	G	G	G	T			S				.	.	.	.	.			T	T
Template Predicted Secondary structure																							.	.	.	.	.	.																																					.	.	.	.	.
Template SS confidence
		690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710							.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.						.	.	.	750	.	.	.	.	.	.	.	.
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	M	A	E	S	T	L	T	Q	A	G	K	P	K	Q	R	Y	I	F	L	F	D	K	V	I	V	V	C	K	A	A	N	K	V	M	A	A	K	T	T	G	A	S	A	R	T	N	T	F	T	Y	K	N	A	Y	V	M	S	E	L	T	I	D	K	N	A	S	L	D	V	K	S	G	G	T	I	T	R	R
Query Conservation
Alig confidence						.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	K	L	.	.	.	.	.	S	G	K	G	L	Q	Q	R	M	F	F	L	F	N	D	V	L	L	Y	T	S	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	F	K	V	H	G	Q	L	P	L	Y	G	M	T	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	E
Template Known Secondary structure						.	.	.	.	.		S	S	S										S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S										S	S					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		766	.	.	.						770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.																.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.														810	.	.
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	Y	V	I	I	M	T	R	D	R	N	E	N	N	E	I	T	Q	L	T	F	Y	F	K	N	E	A	T	R	N	N	W	M	T	A	L	L	L	S	K	S	N	V	S	P	T
Query Conservation
Alig confidence											.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.
Template Sequence		D	P	H	C	L	T	L	R	G	.	.	.	.	.	.	Q	R	Q	S	I	I	V	A	A	S	S	R	S	E	M	E	K	W	V	E	D	I	Q	M	A	I	D	L	A	E	T	M
Template Known Secondary structure											.	.	.	.	.	.	S	S								S	S	S	T	T														S
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
		817	.	.	820	.	.	.	.	.							.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D