Job Description Q45FX5 Confidence 100.00% Date Fri May 3 21:26:37 BST 2013 Rank 12 Aligned Residues 317 % Identity 15% Template c4gouA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ehrgs-rhogef; PDBTitle: crystal structure of an rgs-rhogef from entamoeba histolytica Resolution 2.30 Å Model Dimensions (Å) X: Y: Z:

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		D	L	Q	N	T	P	T	L	K	R	N	R	C	I	R	E	L	Y	D	T	E	K	N	Y	V	A	Q	A	L	V	T	I	I	K	T	F	Y	E	P	L	K	.	.	G	I	I	P	T	S	D	Y	N	I	I	F	G	N	I	E	E	I	N	V	L	H	T	A	L	L	A	D	L	E	Y	P	V	K	V	A	L
Query Conservation																																											.	.
Alig confidence																													.							.							.	.																																.	.	.	.	.	.
Template Conservation																													.							.																																								.	.	.	.	.	.
Template Sequence		D	E	V	K	R	N	T	E	S	I	K	S	L	V	E	S	L	I	Q	D	E	C	N	Y	V	G	V	.	L	T	S	L	S	E	.	F	S	E	I	X	T	K	K	Q	I	L	G	P	D	V	L	K	E	L	F	D	H	I	P	V	L	I	Q	H	H	Q	K	F	I	S	S	L	Q	E	.	.	.	.	.	.
Template Known Secondary structure			S						S	S																			.							.								T	T		S										T	T																T	S	.	.	.	.	.	.
Template Predicted Secondary structure																													.							.																																								.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.									.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.
Query Sequence		G	L	S	D	A	T	P	P	R	P	I	S	L	N	E	C	V	P	Q	T	I	G	E	V	F	I	K	Y	R	D	Q	F	L	A	Y	G	K	Y	C	S	N	L	P	D	S	R	K	L	S	N	E	L	L	.	.	.	.	.	.	.	.	K	T	N	E	F	I	S	R	N	I	N	E	L	T	A	Q	G	N	C
Query Conservation																																																							.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	A	D	E	K	V	G	E	K	L	N	S	G	L	H	F	L	V	L	Y	R	Y	Y	L	R	H	V	P	K	N	I	A	K	L	C	S	I	G	X	T	D	E	I	E	V	G	R	E	L	Y	P	L	P	V	I	E	E	F	D	K	Q	Q	K	X	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	G	G	G	S									T	G	G	G	G	G	G					T	T	T	T											T	S		G	G	G	T	T	T	T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
			382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	K	F	G	M	N	D	L	L	C	V	P	F	Q	R	L	T	K	Y	P	L	L	L	K	E	L	Q	K	K	T	D	L	A	S	P	D	R	K	S	L	E	E	A	V	E	V	M	E	D	V	C	N	Y	I	N	E	E	S	R	D	T	N	A	I	K	V	I	D	E	I	E	Q	S	I	T	D	L	S	M	P
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		K	K	X	S	V	L	Q	X	L	V	Y	P	Y	F	R	V	R	T	Y	Q	A	Y	V	D	D	F	I	K	I	T	K	K	D	S	Q	E	V	K	E	L	E	V	V	H	S	Q	L	A	I	F	Q	E	L	I	N	T	Y	S	D	I	N	K	I	E	R	I	S	D	A	L	K	L	L	F	P	F	S	F	T	S
Template Known Secondary structure		T	S									G	G	G	G																S		T	T																									S															T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		461	.	.										.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.
Query Sequence		L	N	V	.	.	.	.	.	.	.	.	.	K	L	H	D	Y	G	R	V	N	L	D	G	E	V	K	M	A	E	S	T	L	T	Q	A	G	K	P	K	Q	R	Y	I	F	L	F	D	K	V	I	V	V	C	K	A	A	N	K	V	M	A	A	K	T	T	G	A	S	A	R	T	N	T	F	T	Y	K	N	A
Query Conservation					.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.																	.	.	.	.																							.	.	.	.
Template Conservation																														.	.	.	.																							.	.	.	.
Template Sequence		I	X	P	L	F	E	G	K	N	G	I	C	G	I	A	S	L	D	R	F	D	K	T	D	I	N	Q	L	.	.	.	.	S	X	S	L	N	S	R	K	K	L	T	L	I	I	L	Y	R	G	V	V	V	T	.	.	.	.	D	V	P	V	I	R	N	V	S	N	S	I	D	K	S	F	Y	S	F	T	L	I
Template Known Secondary structure			G	G	G	G	S	S	S																	T	T		S	.	.	.	.				S	S											T	T						.	.	.	.		S										S		B			S					G
Template Predicted Secondary structure																														.	.	.	.																							.	.	.	.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.					.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.					.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	M	S	E	L	T	I	D	K	N	A	S	L	D	V	K	S	G	G	T	I	T	R	R	T	Q	Y	V	I	I	M	T	R	D	R	N	E	N	N	E	I	T	Q	L	T	F	Y	F	K	N	E	A	T	R	N	N	W	M	T	A	L	L	L	S	K
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	I	R	D	F	G	T	E	D	S	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	Y	I	D	V	P	E	I	K	K	R	I	W	F	G	C	E	S	T	E	E	F	K	S	C	V	E	A	L	R	T	I	L
Template Known Secondary structure		G	G								G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							G	G	G	T								S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.																				.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D