Job Description Q45FX5 Confidence 100.00% Date Fri May 3 21:26:37 BST 2013 Rank 11 Aligned Residues 338 % Identity 18% Template c3t06E_ PDB info PDB header:signaling protein Chain: E: PDB Molecule:rho guanine nucleotide exchange factor 11; PDBTitle: crystal structure of the dh/ph fragment of pdzrhogef with n-terminal2 regulatory elements in complex with human rhoa Resolution 2.84 Å Model Dimensions (Å) X: Y: Z:

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		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		T	N	R	K	P	S	M	N	E	N	D	L	Q	N	T	P	T	L	K	R	N	R	C	I	R	E	L	Y	D	T	E	K	N	Y	V	A	Q	A	L	V	T	I	I	K	T	F	Y	E	P	L	K	.	.	G	I	I	P	T	S	D	Y	N	I	I	F	G	N	I	E	E	I	N	V	L	H	T	A	L	L	A
Query Conservation																																																					.	.
Alig confidence																																							.														.	.
Template Conservation																																							.
Template Sequence		W	Q	H	T	V	G	K	D	V	V	A	G	L	T	Q	R	E	I	D	R	Q	E	V	I	N	E	L	F	V	T	E	A	S	H	L	R	T	.	L	R	V	L	D	L	I	F	Y	Q	R	M	K	K	E	N	L	M	P	R	E	E	L	A	R	L	F	P	N	L	P	E	L	I	E	I	H	N	S	W	C	E
Template Known Secondary structure		T	T	T	T	T	S	S	S	G	G	G	G			S																							.								T							T	T	S	S									S	S	S
Template Predicted Secondary structure																																							.
Template SS confidence
		716	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.		.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.							.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.
Query Sequence		D	L	E	Y	P	V	K	V	A	L	G	L	S	D	A	T	P	P	R	P	I	S	L	N	E	C	V	P	Q	T	I	G	E	V	F	I	K	Y	.	.	.	.	.	.	R	D	Q	F	L	A	Y	G	K	Y	C	S	N	L	P	D	S	R	K	L	S	N	E	L	L	K	T	N	E	F	I	S	R	N	I	N
Query Conservation																																								.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	M	K	K	L	R	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	I	I	K	E	I	S	D	L	M	L	A	R	F	D	G	P	A	R	E	E	L	Q	Q	V	A	A	Q	F	C	S	Y	Q	S	I	A	L	E	L	I	K	T	K	Q	R	K	E	S	R	F	Q	L	F	M	Q
Template Known Secondary structure									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S													S	T																T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		795	.	.	.	.	800	.	.																	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.
		374	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		E	L	T	A	Q	G	N	C	.	K	F	G	M	N	D	L	L	C	V	P	F	Q	R	L	T	K	Y	P	L	L	L	K	E	L	Q	K	K	T	D	L	A	S	P	D	R	K	S	L	E	E	A	V	E	V	M	E	D	V	C	N	Y	I	N	E	E	S	R	D	T	N	A	I	K	V	I	D	E	I	E	Q
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		E	A	E	S	H	P	Q	C	R	R	L	Q	L	R	D	L	I	I	S	E	M	Q	R	L	T	K	Y	P	L	L	L	E	S	I	I	K	H	T	E	G	G	T	S	E	H	E	K	L	C	R	A	R	D	Q	C	R	E	I	L	K	Y	V	N	E	A	V	K	Q	T	E	N	R	H	R	L	E	G	Y	Q	K
Template Known Secondary structure					T	S	G	G	G	T	T							T	T																			T	S		S	S	S																																					G	G
Template Predicted Secondary structure
Template SS confidence
		859	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.
		453	.	.	.	.	.	.	460	.	.	.	.	.										.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.
Query Sequence		S	I	T	D	L	S	M	P	L	N	V	K	L	.	.	.	.	.	.	.	.	.	H	D	Y	G	R	V	N	L	D	G	E	V	K	M	A	E	S	T	L	T	Q	A	G	K	P	K	Q	R	Y	I	F	L	F	D	K	V	I	V	V	C	K	A	A	N	K	V	M	A	A	K	T	T	G	A	S	A	R	T
Query Conservation															.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																		.	.	.	.																															.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.																															.	.	.	.	.	.	.
Template Sequence		R	L	D	A	T	A	L	E	R	A	S	N	P	L	A	A	E	F	K	S	L	D	L	T	T	R	K	M	I	H	E	G	P	L	T	W	R	I	S	.	.	.	.	K	D	K	T	L	D	L	H	V	L	L	L	E	D	L	L	V	L	L	Q	K	Q	D	E	K	L	L	L	K	C	.	.	.	.	.	.	.
Template Known Secondary structure		G	B				T	T	T	T		S	S					T	T	T	T			G	G	G	S													S	.	.	.	.	S	S											S	S									S	S							.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.																															.	.	.	.	.	.	.
Template SS confidence
		939	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.					.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	F	T	Y	K	N	A	Y	V	M	S	E	L	T	I	D	K	N	A	S	L	D	V	K	S	G	G	T	I	T	R	R	T	Q	Y	V	I	I	M	T	R	D	R	N	E	N	N	E	I	T	Q	L	T	F	Y	F	K	N	E	A	T	R	N	N	W	M	T	A	L	L	L	S	K	S	N	V
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	S	K	T	F	S	P	V	L	K	L	N	A	V	L	I	R	S	V	A	T	D	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	F	I	I	C	T	S	K	L	G	P	P	Q	I	Y	E	L	V	A	L	T	S	S	D	K	N	T	W	M	E	L	L	E	E	A	V	R	N	A
Template Known Secondary structure		B				B		S				G	G	G							T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S	S										S	S																	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1008	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.														.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D