Job Description Q45FX5 Confidence 100.00% Date Fri May 3 21:26:37 BST 2013 Rank 20 Aligned Residues 293 % Identity 19% Template c3mpxA_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:fyve, rhogef and ph domain-containing protein 5; PDBTitle: crystal structure of the dh and ph-1 domains of human fgd5 Resolution 2.80 Å Model Dimensions (Å) X: Y: Z:

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		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.										.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.
Query Sequence		L	K	R	N	R	C	I	R	E	L	Y	D	T	E	K	N	Y	V	A	Q	A	L	V	T	I	I	K	T	F	Y	E	P	L	.	.	.	.	.	.	.	.	.	K	G	I	I	P	T	S	D	Y	N	I	I	F	G	N	I	E	E	I	N	V	L	H	T	A	L	L	A	D	L	E	Y	P	V	K	V	A	L
Query Conservation																																			.	.	.	.	.	.	.	.	.
Alig confidence																						.													.	.	.	.	.	.	.	.	.																																					.	.
Template Conservation																						.																																																										.	.
Template Sequence		S	R	A	L	V	I	A	Q	E	L	L	S	S	E	K	A	Y	V	E	X	.	L	Q	H	L	N	L	D	F	H	G	A	V	X	R	A	L	D	D	X	D	H	E	D	T	L	A	R	E	E	L	R	Q	G	L	S	E	L	P	A	I	H	D	L	H	Q	G	I	L	E	E	L	E	E	R	L	S	N	.	.
Template Known Secondary structure																						.								T												T	T																																				T	.	.
Template Predicted Secondary structure																						.																																																										.	.
Template SS confidence
		891	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910		.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	S	D	A	T	P	P	R	P	I	S	L	N	E	C	V	P	Q	T	I	G	E	V	F	I	K	Y	R	D	Q	F	L	A	Y	G	K	Y	C	S	N	L	P	D	S	R	K	L	S	N	E	L	L	K	T	N	E	F	I	S	R	N	I	N	E	L	T	A	Q	G	N	C	K	F	G	M	N	D	L	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	E	S	Q	Q	K	V	A	D	V	F	L	A	R	E	Q	G	F	D	H	H	A	T	H	I	L	Q	F	D	R	Y	L	G	L	L	S	E	N	C	L	H	S	P	R	L	A	A	A	V	R	E	F	E	.	.	.	.	.	Q	S	T	A	K	H	R	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T					T					T	T	T	T	T																							T	T													.	.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.
Template SS confidence
																970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.						.	.	.	.	.	.	.	1030
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	P	F	Q	R	L	T	K	Y	P	L	L	L	K	E	L	Q	K	K	T	D	L	A	S	P	D	R	K	S	L	E	E	A	V	E	V	M	E	D	V	C	N	Y	I	N	E	E	S	R	D	T	N	A	I	K	V	I	D	E	I	E	Q	S	I	T	D	L	S	M	P	L	N	V	K	L	H	D	Y	G
Query Conservation
Alig confidence																																																																									.	.	.	.
Template Conservation																																																																									.	.	.	.
Template Sequence		L	R	V	V	Q	R	L	F	Q	Y	Q	V	L	L	T	D	Y	L	N	N	L	C	P	D	S	A	E	Y	D	N	T	Q	G	A	L	S	L	I	S	K	V	T	D	R	A	N	D	S	X	E	Q	G	E	N	L	Q	K	L	V	H	I	E	H	S	V	R	G	Q	G	D	L	.	.	.	.	L	Q	P	G	R
Template Known Secondary structure																				T	T	S		T	T	S																									T	T																T					.	.	.	.			T	T
Template Predicted Secondary structure																																																																									.	.	.	.
Template SS confidence
		1037	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.					.	.	1110	.	.
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	N	L	D	G	E	V	K	M	A	E	S	T	L	T	Q	A	G	K	P	K	Q	R	Y	I	F	L	F	D	K	V	I	V	V	C	K	A	A	N	K	V	M	A	A	K	T	T	G	A	S	A	R	T	N	T	F	T	Y	K	N	A	Y	V	M	S	E	L	T	I	D	K	N	A	S	L	D	V	K	S
Query Conservation
Alig confidence																.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		E	F	L	K	E	G	T	L	X	K	V	T	G	K	.	.	.	.	.	N	R	R	P	R	H	L	F	L	X	N	D	V	L	L	Y	T	Y	P	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	K	Y	R	L	K	N	T	L	A	V	S	R	P	V	X	E	K	V	P	.	.	.	.	.	.
Template Known Secondary structure														T	T	.	.	.	.	.											S	S									T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S																T	T	S		.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		1113	.	.	.	.	.	.	1120	.	.	.	.	.	.						.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.														.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.
		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	T	I	T	R	R	T	Q	Y	V	I	I	M	T	R	D	R	N	E	N	N	E	I	T	Q	L	T	F	Y	F	K	N	E	A	T	R	N	N	W	M	T	A	L	L	L	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	Y	A	L	K	I	E	.	.	.	.	.	.	T	S	E	S	C	L	X	L	S	A	S	S	C	A	E	R	D	E	W	Y	G	C	L	S	R	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S						.	.	.	.	.	.		S	S								S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Template SS confidence
											1174	.	.	.	.	.							1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D