Job Description Q45FX5 Confidence 100.00% Date Fri May 3 21:26:37 BST 2013 Rank 5 Aligned Residues 318 % Identity 21% Template c3ksyA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:son of sevenless homolog 1; PDBTitle: crystal structure of the histone domain, dh-ph unit, and2 catalytic unit of the ras activator son of sevenless (sos) Resolution 3.18 Å Model Dimensions (Å) X:75.282 Y:71.166 Z:51.359

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		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.				.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		K	R	N	R	C	I	R	E	L	Y	D	T	E	K	N	Y	V	A	Q	A	L	V	T	I	I	K	T	F	Y	E	P	L	K	G	.	.	.	I	I	P	T	S	D	Y	N	I	I	F	G	N	I	E	E	I	N	V	L	H	T	A	L	L	A	D	L	E	Y	P	V	K	V	A	L	G	L	S	D	A	T	P
Query Conservation																																				.	.	.
Alig confidence																					.															.	.	.																																						.	.	.	.	.	.
Template Conservation																					.																																																							.	.	.	.	.	.
Template Sequence		T	Y	Y	D	L	V	K	A	F	M	A	E	I	R	Q	Y	I	R	E	.	L	N	L	I	I	K	V	F	R	E	P	F	V	S	N	S	K	L	F	S	A	N	D	V	E	N	I	F	S	R	I	V	D	I	H	E	L	S	V	K	L	L	G	H	I	E	D	T	V	E	M	T	D	E	.	.	.	.	.	.
Template Known Secondary structure																					.							T	T								T	T	T	S										S	S																								S	.	.	.	.	.	.
Template Predicted Secondary structure																					.																																																							.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.			.	.	.	.	.	.	.	350	.	.	.	.	.			.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																												.	.														.	.																											.
Query SS confidence																												.	.														.	.																											.
Query Sequence		P	R	P	I	S	L	N	E	C	V	P	Q	T	I	G	E	V	F	I	K	Y	R	D	Q	F	L	.	.	A	Y	G	K	Y	C	S	N	L	P	D	S	R	.	.	K	L	S	N	E	L	L	K	T	N	E	F	I	S	R	N	I	N	E	L	T	A	Q	G	N	C	.	K	F	G	M	N	D	L	L	C	V
Query Conservation																												.	.														.	.																											.
Alig confidence		.	.	.	.	.	.	.																				.	.														.	.																											.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	G	S	P	H	P	L	V	G	S	C	F	E	D	L	A	E	E	L	A	F	D	P	Y	E	S	Y	A	R	D	I	L	R	P	G	F	H	D	R	F	L	S	Q	L	S	K	P	G	A	A	L	Y	L	Q	S	I	G	E	G	F	K	E	A	V	Q	Y	V	L	P	R	L	L	L	A
Template Known Secondary structure		.	.	.	.	.	.	.	S	S	S	S													T	T	T	T	S												T	T							T	T	S	S	S	T	T										T	T								T					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.										.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.
Query Sequence		P	F	Q	R	L	T	K	Y	P	L	L	L	K	E	L	Q	K	K	T	D	L	A	S	P	D	R	K	S	L	E	E	A	V	E	V	M	E	D	V	C	N	.	.	.	.	.	.	.	.	.	Y	I	N	E	E	S	R	D	T	N	A	I	K	V	I	D	E	I	E	Q	S	I	T	D	L	S	M	P	L	N
Query Conservation																																											.	.	.	.	.	.	.	.	.
Alig confidence																			.																								.	.	.	.	.	.	.	.	.																												.	.
Template Conservation																			.																																																												.	.
Template Sequence		P	V	Y	H	C	L	H	Y	F	E	L	L	K	Q	L	E	E	.	K	S	E	D	Q	E	D	K	E	C	L	K	Q	A	I	T	A	L	L	N	V	Q	S	G	M	E	K	I	C	S	K	S	L	A	K	R	R	L	S	E	S	A	A	I	K	K	M	N	E	I	Q	K	N	I	D	G	W	E	G	.	.	K
Template Known Secondary structure																			.	S																	T											T	T	S	T	T												S								T	S	S	S			S	.	.	S
Template Predicted Secondary structure																			.																																																												.	.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.			.
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	L	H	D	Y	G	R	V	N	L	D	G	E	V	K	M	A	E	S	T	L	T	Q	A	G	K	P	K	Q	R	Y	I	F	L	F	D	K	V	I	V	V	C	K	A	A	N	K	V	M	A	A	K	T	T	G	A	S	A	R	T	N	T	F	T	Y	K	N	A	Y	V	M	S	E	L	T	I	D	K	N
Query Conservation
Alig confidence																		.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																		.	.	.	.	.	.	.																								.	.	.	.
Template Sequence		D	I	G	Q	C	C	N	E	F	I	M	E	G	T	L	T	.	.	.	.	.	.	.	R	V	G	A	K	H	E	R	H	I	F	L	F	D	G	L	M	I	C	C	K	S	N	.	.	.	.	H	G	Q	P	R	L	P	G	A	S	N	A	E	Y	R	L	K	E	K	F	F	M	R	K	V	Q	I	N	D	K
Template Known Secondary structure			G	G	G	T		S										.	.	.	.	.	.	.		T	T		S	S								T	T									.	.	.	.	T	T					T	T	S				S										S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.																								.	.	.	.
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.								.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.					.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	D	V	K	S	G	G	T	I	T	R	R	T	Q	Y	V	I	I	M	T	R	D	R	N	E	N	N	E	I	T	Q	L	T	F	Y	F	K	N	E	A	T	R	N	N	W	M	T	A	L	L	L	S	K	S	N
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Sequence		D	D	T	N	E	Y	K	.	.	.	.	.	.	.	.	.	H	A	F	E	I	I	L	K	D	E	.	.	.	.	.	N	S	V	I	F	S	A	K	S	A	E	E	K	N	N	W	M	A	A	L	I	S	L	Q	Y	R
Template Known Secondary structure				S	S	S			.	.	.	.	.	.	.	.	.	S							T	T	S	.	.	.	.	.								S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template SS confidence
		505	.	.	.	.	510	.										.	.	.	.	.	.	.	.	520	.						.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D