Job Description Q45FX5 Confidence 100.00% Date Fri May 3 21:26:37 BST 2013 Rank 18 Aligned Residues 314 % Identity 23% Template c2z0qA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 3; PDBTitle: crystal structure of dh-ph domain of rhogef3(xpln) Resolution 1.79 Å Model Dimensions (Å) X: Y: Z:

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		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		N	T	P	T	L	K	R	N	R	C	I	R	E	L	Y	D	T	E	K	N	Y	V	A	Q	A	L	V	T	I	I	K	T	F	Y	E	P	L	K	.	.	G	I	I	P	T	S	D	Y	N	I	I	F	G	N	I	E	E	I	N	V	L	H	T	A	L	L	A	D	L	E	Y	P	V	K	V	A	L	G	L	S
Query Conservation																																								.	.
Alig confidence																										.														.	.																																				.	.	.	.	.
Template Conservation																										.																																																			.	.	.	.	.
Template Sequence		T	A	K	E	I	K	R	Q	E	A	I	F	E	L	S	Q	G	E	E	D	L	I	E	D	.	L	K	L	A	K	K	A	Y	H	D	P	X	L	K	L	S	I	X	T	E	Q	E	L	N	Q	I	F	G	T	L	D	S	L	I	P	L	H	E	E	L	L	S	Q	L	R	D	V	R	K	P	.	.	.	.	.
Template Known Secondary structure																										.								T							T	T	S	S										T	T																					T	.	.	.	.	.
Template Predicted Secondary structure																										.																																																			.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	T	P	P	R	P	I	S	L	N	E	C	V	P	Q	T	I	G	E	V	F	I	K	Y	R	D	Q	F	L	A	Y	G	K	Y	C	S	N	L	P	D	S	R	K	L	S	N	E	L	L	K	T	N	E	F	I	S	R	N	I	N	E	L	T	A	Q	G	N	C	K	F	G	M	N	D	L	L	C	V	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	D	G	S	T	E	H	V	G	P	I	L	V	G	W	L	P	C	L	S	S	Y	D	S	Y	C	S	N	Q	V	A	A	K	A	L	L	D	H	K	K	Q	D	H	R	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	D	L	W	N	F	L	D	I	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T	S			S										G	G	G	G	G																				T	T						.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.														.	.	.	.	130	.	.	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	R	L	T	K	Y	P	L	L	L	K	E	L	Q	K	K	T	D	L	A	S	P	D	R	K	S	L	E	E	A	V	E	V	M	E	D	V	C	N	Y	I	N	E	E	S	R	D	T	N	A	I	K	V	I	D	E	I	E	Q	S	I	T	D	L	S	M	P	L	N	V	K	L	H	D	Y	G	R	V	N
Query Conservation
Alig confidence																																																																							.	.	.
Template Conservation																																																																							.	.	.
Template Sequence		R	S	R	L	V	K	Y	P	L	L	L	R	E	I	L	R	H	T	P	N	D	N	P	D	Q	Q	H	L	E	E	A	I	N	I	I	Q	G	I	V	A	E	I	N	T	K	T	G	E	S	E	C	R	Y	Y	K	E	R	L	L	Y	L	E	E	G	Q	K	D	S	L	.	.	.	I	D	S	S	R	V	L	C
Template Known Secondary structure																		T	S		T	T	S	T																																							S	T	T						.	.	.			T
Template Predicted Secondary structure																																																																							.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	G	E	V	K	M	A	E	S	T	L	T	Q	A	G	K	P	K	Q	R	Y	I	F	L	F	D	K	V	I	V	V	C	K	A	A	N	K	V	M	A	A	K	T	T	G	A	S	A	R	T	N	T	F	T	Y	K	N	A	Y	V	M	S	E	L	T	I	D	K	N	A	S	L	D	V	K	S	G	G	T
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Sequence		C	H	G	E	L	K	N	N	R	G	.	.	.	.	.	.	.	.	V	K	L	H	V	F	L	F	Q	E	V	L	V	I	T	R	A	V	T	H	N	E	Q	L	C	Y	.	.	.	.	.	.	.	.	.	Q	L	Y	R	Q	P	I	P	V	K	D	L	T	L	E	D	L	Q	D	G	E	V	R	L	G	G	S
Template Known Secondary structure									T	T	S	.	.	.	.	.	.	.	.									S	S											T	T					.	.	.	.	.	.	.	.	.			S	S					G	G	G								T	T	T	S				S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.									.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.										.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		553	.	.	.	.	.			.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		I	T	R	R	T	Q	.	.	Y	V	I	I	M	T	R	D	R	N	E	N	N	E	I	T	Q	L	T	F	Y	F	K	N	E	A	T	R	N	N	W	M	T	A	L	L	L	S	K	S
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		L	A	F	S	N	N	E	R	V	K	N	F	F	R	V	S	F	K	N	G	S	Q	S	Q	T	H	S	L	Q	A	N	D	T	F	N	K	Q	Q	W	L	N	C	I	R	Q	A	K	E
Template Known Secondary structure					S					T	S	S									G	G	G									S	S
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D