Job Description Q45FX5 Confidence 98.68% Date Fri May 3 21:26:37 BST 2013 Rank 277 Aligned Residues 314 % Identity 11% Template c2q13A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:dcc-interacting protein 13 alpha; PDBTitle: crystal structure of bar-ph domain of appl1 Resolution 2.05 Å

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		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.				.	.	.	270	.	.	.	.										.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																															.	.	.									.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.									.	.	.	.	.	.	.	.	.
Query Sequence		T	L	K	R	N	R	C	I	R	E	L	Y	D	T	E	K	N	Y	V	A	Q	A	L	V	T	I	I	K	T	.	.	.	F	Y	E	P	L	K	G	I	.	.	.	.	.	.	.	.	.	I	P	T	S	D	Y	N	I	I	F	G	N	I	E	E	I	N	V	L	H	T	A	L	L	A	D	L	E	Y	P	V
Query Conservation																															.	.	.									.	.	.	.	.	.	.	.	.
Alig confidence																					.										.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation																					.
Template Sequence		A	T	A	I	S	N	Y	M	N	Q	L	Y	Q	A	M	H	R	I	Y	.	D	A	Q	N	E	L	S	A	A	T	H	L	T	S	K	L	L	K	E	Y	E	K	Q	R	F	P	L	D	E	V	M	S	S	T	L	Q	Q	F	S	K	V	I	D	E	L	S	S	C	H	A	V	L	S	T	Q	L	A	D	A	M
Template Known Secondary structure																					.																			T	T	T	T	S																																					T
Template Predicted Secondary structure																					.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.				.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																																													.	.	.																		.
Query SS confidence																																																													.	.	.																		.
Query Sequence		K	V	A	L	G	L	S	D	A	T	P	P	R	P	I	S	L	N	E	C	V	P	Q	T	I	G	E	V	F	I	K	Y	R	D	Q	F	L	A	Y	G	K	Y	C	S	N	L	P	D	S	R	K	L	S	N	E	L	L	K	T	.	.	.	N	E	F	I	S	R	N	I	N	E	L	T	A	Q	G	N	C	.
Query Conservation																																																													.	.	.																		.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.																		.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	I	T	Q	F	K	E	R	D	L	K	E	I	L	T	L	K	E	V	F	Q	I	A	S	N	D	H	D	A	A	I	N	R	Y	S	R	L	S	K	K	R	E	N	D	K	V	K	Y	E	V	T	E	D	V	Y	T	S	R	K	K	Q
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T																												T			S	S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112																		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.						.	.	.	.	450	.	.	.	.
Predicted Secondary structure																																													.	.																						.	.	.	.	.
Query SS confidence																																													.	.																						.	.	.	.	.
Query Sequence		K	F	G	M	N	D	L	L	C	V	P	F	Q	R	L	T	K	Y	P	L	L	L	K	E	L	Q	K	K	T	D	L	A	S	P	D	R	K	S	L	E	E	A	V	.	.	E	V	M	E	D	V	C	N	Y	I	N	E	E	S	R	D	T	N	A	I	K	.	.	.	.	.	V	I	D	E	I	E	Q	S	I
Query Conservation																																													.	.																						.	.	.	.	.
Alig confidence																																													.	.																						.	.	.	.	.
Template Conservation
Template Sequence		H	Q	T	M	M	H	Y	F	C	A	L	N	T	L	Q	Y	K	K	K	I	A	L	L	E	P	L	L	G	Y	M	Q	A	Q	I	S	F	F	K	M	G	S	E	N	L	N	E	Q	L	E	E	F	L	A	N	I	G	T	S	V	Q	N	V	R	R	E	M	D	S	D	I	E	T	M	Q	Q	T	I	E	D	L
Template Known Secondary structure																																													S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	L	S	M	P	L	N	V	K	L	H	D	Y	G	R	V	N	L	D	G	E	V	K	M	A	E	S	T	L	T	Q	A	G	K	P	K	Q	R	Y	I	F	L	F	D	K	V	I	V	V	C	K	A	A	N	K	V	M	A	A	K	T	T	G	A	S	A	R	T	N	T	F	T	Y	K	N	A	Y	V	M
Query Conservation
Alig confidence																																				.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	A	S	D	P	L	Y	V	P	D	P	D	P	T	K	F	P	V	N	R	N	L	T	R	K	A	G	Y	L	N	A	R	T	.	W	D	R	Q	F	Y	F	T	Q	G	G	N	L	M	S	Q	A	R	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	G	G	L	A	M	D	I
Template Known Secondary structure						G	G	G	S	S	S	S			T	T	T	S							S											.										T	T							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																				.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.																	.	310	.	.	.	.	.	.	.
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	L	T	I	D	K	N	A	S	L	D	V	K	S	G	G	T	I	T	R	R	T	Q	Y	V	I	I	M	T	R	D	R	N	E	N	N	E	I	T	Q	L	T	F	Y	F	K	N	E	A	T	R	N	N	W	M	T	A	L	L	L	S	K	S	N	V
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template Sequence		D	N	C	S	V	M	A	V	D	C	E	D	.	.	.	.	.	.	.	.	.	.	R	R	Y	C	F	Q	I	T	.	.	.	.	S	F	D	G	K	K	S	S	I	L	Q	A	E	S	K	K	D	H	E	E	W	I	C	T	I	N	N	I	S	K	Q	I
Template Known Secondary structure		T	T									T	T	.	.	.	.	.	.	.	.	.	.		S	S						.	.	.	.		T	T	S		B							S	S																T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.											.	.	340	.	.	.	.	.					.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D