Return to main results Retrieve Phyre Job Id

Job DescriptionQ45FX5
Confidence99.43%DateFri May 3 21:26:37 BST 2013
Rank191Aligned Residues54
% Identity30%Templatec2krnA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cd2-associated protein; PDBTitle: high resolution structure of the second sh3 domain of cd2ap
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   935....940.........950.........960.........970.........980.........990
Predicted Secondary structure 






























Query SS confidence 























































Query Sequence  HDYDAPSPNNEGKFLSFKTGDIVVLLDTVGEDRGWWKGQVNNKSGFFPLSYVKPYD
Query Conservation 
   
 
  
  




 




 



   




 

  
  
 

 


 
  
Alig confidence 




























..
























Template Conservation    

  
 
    


   

 
 
    ..   
  
   
  
 

  


 
 
Template Sequence  CKVLFDYSPQNEDELELIVGDVIDVIEEV. . EEGWWSGTLNNKLGLFPSNFVKELE
Template Known Secondary structure 
S
B

SSTTB

B
TT
..TTTTTTT


Template Predicted Secondary structure 












..





Template SS confidence 























































   7..10.........20.........30..... ....40.........50.........60
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D